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    SS18L1 SS18L1 subunit of BAF chromatin remodeling complex [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700308, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SS18L1provided by VGNC
    Official Full Name
    SS18L1 subunit of BAF chromatin remodeling complexprovided by VGNC
    Primary source
    VGNC:VGNC:81580
    See related
    Ensembl:ENSMMUG00000012606
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SS18L1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (97286311..97326100)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (2203556..2241536, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene LSM family member 14B Neighboring gene proteasome 20S subunit alpha 7 Neighboring gene mitochondrial ribosome associated GTPase 2 Neighboring gene uncharacterized LOC114670630

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of dendrite morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium-responsive transactivator
    Names
    SS18L1, nBAF chromatin remodeling complex subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      97286311..97326100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015148655.2 → XP_015004141.2  calcium-responsive transactivator isoform X2

      UniProtKB/TrEMBL
      F7F5F9, F7F9F1, H9FSQ5
      Related
      ENSMMUP00000016551.4, ENSMMUT00000017675.4
      Conserved Domains (1) summary
      pfam05030
      Location:14 → 73
      SSXT; SSXT protein (N-terminal region)

    2. XM_015148654.2 → XP_015004140.2  calcium-responsive transactivator isoform X1

      UniProtKB/TrEMBL
      A0A1D5QQ97
      Related
      ENSMMUP00000016549.4, ENSMMUT00000017673.4
      Conserved Domains (1) summary
      pfam05030
      Location:14 → 73
      SSXT; SSXT protein (N-terminal region)

    3. XM_028828557.1 → XP_028684390.1  calcium-responsive transactivator isoform X4

    4. XM_028828558.1 → XP_028684391.1  calcium-responsive transactivator isoform X5

      UniProtKB/TrEMBL
      G7N4A1
      Conserved Domains (1) summary
      pfam05030
      Location:52 → 76
      SSXT; SSXT protein (N-terminal region)

    5. XM_015148656.2 → XP_015004142.1  calcium-responsive transactivator isoform X3

      UniProtKB/TrEMBL
      G7N4A1

    6. XM_015148657.2 → XP_015004143.1  calcium-responsive transactivator isoform X4

    RNA

    1. XR_003720207.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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