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    TRIM54 tripartite motif containing 54 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699826, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRIM54provided by VGNC
    Official Full Name
    tripartite motif containing 54provided by VGNC
    Primary source
    VGNC:VGNC:79003
    Locus tag
    EGK_05160
    See related
    Ensembl:ENSMMUG00000010507
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRIM54 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (81644544..81670118, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (27576571..27601440)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIIC subunit 2 Neighboring gene mitochondrial inner membrane protein MPV17 Neighboring gene urocortin Neighboring gene DnaJ heat shock protein family (Hsp40) member C5 gamma Neighboring gene solute carrier family 30 member 3 Neighboring gene carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tripartite motif-containing protein 54

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266026.1 → NP_001252955.1  tripartite motif-containing protein 54

      See identical proteins and their annotated locations for NP_001252955.1

      Status: PROVISIONAL

      Source sequence(s)
      JV636284
      UniProtKB/TrEMBL
      A0A1D5Q6D6, A0A8J8XU71, F7B8H2, F7E925, G7N9N5
      Related
      ENSMMUP00000013771.4, ENSMMUT00000014701.4
      Conserved Domains (2) summary
      cd16761
      Location:24 → 82
      RING-HC_MuRF3; RING finger, HC subclass, found in muscle-specific RING finger protein 3 (MuRF-3) and similar proteins
      cd19833
      Location:124 → 166
      Bbox2_MuRF3_C-II; B-box-type 2 zinc finger found in muscle-specific RING finger protein 3 (MuRF-3) and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      81644544..81670118 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111907.2 → XP_014967393.1  tripartite motif-containing protein 54 isoform X1

      UniProtKB/TrEMBL
      F7E925
      Conserved Domains (2) summary
      cd16761
      Location:24 → 82
      RING-HC_MuRF3; RING finger, HC subclass, found in muscle-specific RING finger protein 3 (MuRF-3) and similar proteins
      cd19833
      Location:124 → 166
      Bbox2_MuRF3_C-II; B-box-type 2 zinc finger found in muscle-specific RING finger protein 3 (MuRF-3) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials