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    RNF123 ring finger protein 123 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705340, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RNF123provided by VGNC
    Official Full Name
    ring finger protein 123provided by VGNC
    Primary source
    VGNC:VGNC:76790
    Locus tag
    EGK_11630
    See related
    Ensembl:ENSMMUG00000014564
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RNF123 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    39
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (105803401..105837454)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (92614678..92648724, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene acylaminoacyl-peptide hydrolase Neighboring gene macrophage stimulating 1 Neighboring gene adhesion molecule with Ig like domain 3 Neighboring gene GDP-mannose pyrophosphorylase B Neighboring gene inositol hexakisphosphate kinase 1 Neighboring gene cadherin related family member 4 Neighboring gene inka box actin regulator 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF123
    XP_014986391.1
    XP_014986392.1
    XP_014986393.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      105803401..105837454
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130905.2 → XP_014986391.1  E3 ubiquitin-protein ligase RNF123 isoform X1

      UniProtKB/TrEMBL
      A0A663DBF3, A0A8J8YFE9, F7GRK4, F7GRL2, G7ML89, I0FU39
      Related
      ENSMMUP00000019143.4, ENSMMUT00000020452.4
      Conserved Domains (2) summary
      cd12882
      Location:123 → 250
      SPRY_RNF123; SPRY domain at N-terminus of ring finger protein 123
      cd16541
      Location:1252 → 1292
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins

    2. XM_015130906.2 → XP_014986392.1  E3 ubiquitin-protein ligase RNF123 isoform X2

      UniProtKB/TrEMBL
      I0FU39
      Conserved Domains (2) summary
      pfam13920
      Location:1208 → 1256
      zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
      cd12882
      Location:123 → 250
      SPRY_RNF123; SPRY domain at N-terminus of ring finger protein 123

    3. XM_015130907.2 → XP_014986393.1  E3 ubiquitin-protein ligase RNF123 isoform X3

      UniProtKB/TrEMBL
      I0FU39
      Conserved Domains (2) summary
      pfam13920
      Location:1104 → 1152
      zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
      cl02614
      Location:1 → 104
      SPRY; SPRY domain

    RNA

    1. XR_003727295.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials