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    LSAMP limbic system associated membrane protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713016, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LSAMPprovided by VGNC
    Official Full Name
    limbic system associated membrane proteinprovided by VGNC
    Primary source
    VGNC:VGNC:74450
    See related
    Ensembl:ENSMMUG00000012579
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LSAMP in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (159826292..160475148)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (36870023..37519247, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene uncharacterized LOC106996788 Neighboring gene growth associated protein 43 Neighboring gene uncharacterized LOC114676161

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    limbic system-associated membrane protein
    Names
    limbic system-associated membrane protein preproprotein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      159826292..160475148
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015129946.2 → XP_014985432.1  limbic system-associated membrane protein isoform X2

      UniProtKB/TrEMBL
      F7FED6, H9FMM4
      Related
      ENSMMUP00000016514.4, ENSMMUT00000017634.4
      Conserved Domains (3) summary
      pfam13927
      Location:218 → 294
      Ig_3; Immunoglobulin domain
      cd00096
      Location:235 → 239
      Ig; Ig strand B [structural motif]
      cl11960
      Location:38 → 128
      Ig; Immunoglobulin domain

    2. XM_015129944.2 → XP_014985430.1  limbic system-associated membrane protein isoform X1

      UniProtKB/TrEMBL
      H9FMM4
      Conserved Domains (3) summary
      pfam13927
      Location:218 → 294
      Ig_3; Immunoglobulin domain
      cd00096
      Location:235 → 239
      Ig; Ig strand B [structural motif]
      cl11960
      Location:38 → 128
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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