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    SLC25A13 solute carrier family 25 member 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699911, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC25A13provided by VGNC
    Official Full Name
    solute carrier family 25 member 13provided by VGNC
    Primary source
    VGNC:VGNC:77431
    See related
    Ensembl:ENSMMUG00000005250
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC25A13 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (109801127..110004338)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (121479522..121679181, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene dynein cytoplasmic 1 intermediate chain 1 Neighboring gene uncharacterized LOC106997564

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-aspartate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-glutamate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-glutamate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in aspartate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in malate-aspartate shuttle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium-binding mitochondrial carrier protein Aralar2
    Names
    solute carrier family 25, member 13 (citrin)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      109801127..110004338
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134303.2 → XP_014989789.1  calcium-binding mitochondrial carrier protein Aralar2 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QP46, F7BR40, H9ESY4
      Related
      ENSMMUP00000006949.3, ENSMMUT00000007393.4
      Conserved Domains (4) summary
      PTZ00168
      Location:327 → 590
      PTZ00168; mitochondrial carrier protein; Provisional
      pfam00153
      Location:516 → 611
      Mito_carr; Mitochondrial carrier protein
      pfam13499
      Location:17 → 81
      EF-hand_7; EF-hand domain pair
      cl08302
      Location:19 → 81
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

    2. XM_015134305.2 → XP_014989791.1  calcium-binding mitochondrial carrier protein Aralar2 isoform X6

      UniProtKB/TrEMBL
      G7MLU4
      Conserved Domains (1) summary
      pfam00153
      Location:408 → 503
      Mito_carr; Mitochondrial carrier protein

    3. XM_028846042.1 → XP_028701875.1  calcium-binding mitochondrial carrier protein Aralar2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QP46
      Conserved Domains (4) summary
      cd15897
      Location:69 → 95
      EFh_PEF; EF-hand motif [structural motif]
      pfam00153
      Location:530 → 620
      Mito_carr; Mitochondrial carrier protein
      pfam13499
      Location:28 → 93
      EF-hand_7; EF-hand domain pair
      cl25352
      Location:68 → 195
      EFh_PEF; The penta-EF hand (PEF) family

    4. XM_015134304.2 → XP_014989790.1  calcium-binding mitochondrial carrier protein Aralar2 isoform X5

      UniProtKB/TrEMBL
      A0A5F8A6Y0
      Conserved Domains (2) summary
      PTZ00168
      Location:293 → 556
      PTZ00168; mitochondrial carrier protein; Provisional
      pfam00153
      Location:482 → 577
      Mito_carr; Mitochondrial carrier protein

    5. XM_028846043.1 → XP_028701876.1  calcium-binding mitochondrial carrier protein Aralar2 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A6Y0, A0A5F8A7Y2
      Related
      ENSMMUP00000073482.1, ENSMMUT00000090131.1
      Conserved Domains (4) summary
      cd15897
      Location:61 → 87
      EFh_PEF; EF-hand motif [structural motif]
      pfam00153
      Location:522 → 612
      Mito_carr; Mitochondrial carrier protein
      pfam13499
      Location:28 → 85
      EF-hand_7; EF-hand domain pair
      cl25352
      Location:60 → 187
      EFh_PEF; The penta-EF hand (PEF) family

    6. XM_028846044.1 → XP_028701877.1  calcium-binding mitochondrial carrier protein Aralar2 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AMY3
      Related
      ENSMMUP00000073129.1, ENSMMUT00000079285.1
      Conserved Domains (4) summary
      cd15897
      Location:58 → 84
      EFh_PEF; EF-hand motif [structural motif]
      pfam00153
      Location:519 → 609
      Mito_carr; Mitochondrial carrier protein
      pfam13499
      Location:25 → 82
      EF-hand_7; EF-hand domain pair
      cl25352
      Location:57 → 184
      EFh_PEF; The penta-EF hand (PEF) family
    Nucleotide Protein
    Heading Accession and Version

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