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    BTRC beta-transducin repeat containing E3 ubiquitin protein ligase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711843, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BTRCprovided by VGNC
    Official Full Name
    beta-transducin repeat containing E3 ubiquitin protein ligaseprovided by VGNC
    Primary source
    VGNC:VGNC:100303
    Locus tag
    EGK_19996
    See related
    Ensembl:ENSMMUG00000006741
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BTRC in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (101838329..102043524)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (97015288..97220208)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670141 Neighboring gene U2 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene DNA polymerase lambda Neighboring gene 40S ribosomal protein S27-like Neighboring gene deleted in primary ciliary dyskinesia homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box/WD repeat-containing protein 1A
    Names
    beta-transducin repeat containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      101838329..102043524
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028826795.1 → XP_028682628.1  F-box/WD repeat-containing protein 1A isoform X5

      UniProtKB/TrEMBL
      A0A1D5QQM3
      Conserved Domains (4) summary
      cd00200
      Location:285 → 515
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:288 → 323
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:121 → 159
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:163 → 210
      F-box-like

    2. XM_015148044.2 → XP_015003530.1  F-box/WD repeat-containing protein 1A isoform X8

      UniProtKB/TrEMBL
      A0A1D5QQW0, F7HD79, H9FCG8, H9YVD0
      Related
      ENSMMUP00000050438.2, ENSMMUT00000078415.2
      Conserved Domains (4) summary
      cd00200
      Location:267 → 545
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:270 → 305
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:103 → 141
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:145 → 192
      F-box-like

    3. XM_028826794.1 → XP_028682627.1  F-box/WD repeat-containing protein 1A isoform X4

      UniProtKB/TrEMBL
      A0A1D5QQM3
      Conserved Domains (4) summary
      cd00200
      Location:303 → 533
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:306 → 341
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:139 → 177
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:181 → 228
      F-box-like

    4. XM_028826796.1 → XP_028682629.1  F-box/WD repeat-containing protein 1A isoform X7

      UniProtKB/TrEMBL
      A0A1D5QQM3
      Conserved Domains (4) summary
      cd00200
      Location:267 → 497
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:270 → 305
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:103 → 141
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:145 → 192
      F-box-like

    5. XM_015148038.2 → XP_015003524.2  F-box/WD repeat-containing protein 1A isoform X2

      Conserved Domains (4) summary
      cd00200
      Location:432 → 710
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:435 → 470
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:268 → 306
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:310 → 357
      F-box-like

    6. XM_015148041.2 → XP_015003527.1  F-box/WD repeat-containing protein 1A isoform X6

      UniProtKB/TrEMBL
      A0A1D5Q9G1, A0A663D8F3, A0A8J8YKH6, G7N0Y9, H9FCG8
      Related
      ENSMMUP00000044679.2, ENSMMUT00000074199.2
      Conserved Domains (4) summary
      cd00200
      Location:303 → 581
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:306 → 341
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:139 → 177
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:181 → 228
      F-box-like

    7. XM_028826792.1 → XP_028682625.1  F-box/WD repeat-containing protein 1A isoform X1

      Conserved Domains (4) summary
      cd00200
      Location:432 → 662
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:435 → 470
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:268 → 306
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:310 → 357
      F-box-like

    8. XM_028826793.1 → XP_028682626.1  F-box/WD repeat-containing protein 1A isoform X3

      Conserved Domains (4) summary
      cd00200
      Location:307 → 537
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:310 → 345
      7WD40; WD40 repeat [structural motif]
      pfam12125
      Location:143 → 181
      Beta-TrCP_D; D domain of beta-TrCP
      pfam12937
      Location:185 → 232
      F-box-like
    Nucleotide Protein
    Heading Accession and Version

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