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    SYTL4 synaptotagmin like 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700889, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SYTL4provided by VGNC
    Official Full Name
    synaptotagmin like 4provided by VGNC
    Primary source
    VGNC:VGNC:78124
    Locus tag
    EGK_20727
    See related
    Ensembl:ENSMMUG00000008209
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SYTL4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (97453058..97508849, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (94833673..94889480, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene tenomodulin Neighboring gene tetraspanin 6 Neighboring gene sushi repeat containing protein X-linked 2 Neighboring gene thymosin beta-4 pseudogene Neighboring gene double-strand-break repair protein rad21 homolog pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables neurexin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in exocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-like protein 4
    Names
    synaptotagmin-like protein 4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      97453058..97508849 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028842251.1 → XP_028698084.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      A0A5F8ACU8, A0A8J8Y4F6, F7GWJ4, G7NSF7
      Related
      ENSMMUP00000074759.1, ENSMMUT00000084854.1
      Conserved Domains (4) summary
      cd04020
      Location:495 → 660
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cd04029
      Location:356 → 480
      C2A_SLP-4_5; C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5
      cd15764
      Location:58 → 107
      FYVE_Slp4; FYVE-related domain found in synaptotagmin-like protein 4 (Slp4) and similar proteins
      cl22851
      Location:8 → 121
      PHD_SF; PHD finger superfamily

    2. XM_015127794.2 → XP_014983280.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      A0A5F8ACU8, A0A8J8Y4F6, F7GWJ4, G7NSF7
      Related
      ENSMMUP00000010761.4, ENSMMUT00000011479.4
      Conserved Domains (4) summary
      cd04020
      Location:495 → 660
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cd04029
      Location:356 → 480
      C2A_SLP-4_5; C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5
      cd15764
      Location:58 → 107
      FYVE_Slp4; FYVE-related domain found in synaptotagmin-like protein 4 (Slp4) and similar proteins
      cl22851
      Location:8 → 121
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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