U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717679, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TANC2provided by VGNC
    Official Full Name
    tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2provided by VGNC
    Primary source
    VGNC:VGNC:99281
    See related
    Ensembl:ENSMMUG00000013411
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TANC2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (59412929..59888860)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (56563047..57040490)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene multifunctional methyltransferase subunit TRM112-like protein pseudogene Neighboring gene microRNA mir-633 Neighboring gene dnaJ homolog subfamily B member 6-like Neighboring gene uncharacterized LOC106994089 Neighboring gene uncharacterized LOC114673165 Neighboring gene density-regulated protein pseudogene Neighboring gene uncharacterized LOC114673166 Neighboring gene cytochrome b561 Neighboring gene angiotensin I converting enzyme

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of dendritic spine morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendritic spine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein TANC2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      59412929..59888860
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015120072.2 → XP_014975558.1  protein TANC2 isoform X1

      UniProtKB/TrEMBL
      F6Z3C1, G7NJ72
      Related
      ENSMMUP00000017615.4, ENSMMUT00000018810.4
      Conserved Domains (5) summary
      PHA03095
      Location:930 → 1224
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1324 → 1459
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG0666
      Location:1170 → 1296
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00006
      Location:1331 → 1356
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1174 → 1204
      ANK; ANK repeat [structural motif]

    2. XM_015120073.2 → XP_014975559.1  protein TANC2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R659, G7NJ72
      Related
      ENSMMUP00000055797.1, ENSMMUT00000078004.2
      Conserved Domains (5) summary
      PHA03095
      Location:930 → 1224
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1314 → 1449
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG0666
      Location:1170 → 1296
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00006
      Location:1321 → 1346
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1174 → 1204
      ANK; ANK repeat [structural motif]

    3. XM_015120074.2 → XP_014975560.1  protein TANC2 isoform X3

      UniProtKB/TrEMBL
      F6Z3D1, G7NJ72
      Related
      ENSMMUP00000017614.4, ENSMMUT00000018809.4
      Conserved Domains (5) summary
      PHA03095
      Location:893 → 1187
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1287 → 1422
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG0666
      Location:1133 → 1259
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00006
      Location:1294 → 1319
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1137 → 1167
      ANK; ANK repeat [structural motif]

    4. XM_015120075.2 → XP_014975561.1  protein TANC2 isoform X4

      UniProtKB/TrEMBL
      G7NJ72
      Conserved Domains (5) summary
      PHA03095
      Location:893 → 1187
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1287 → 1422
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG0666
      Location:1133 → 1259
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00006
      Location:1294 → 1319
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1137 → 1167
      ANK; ANK repeat [structural motif]

    5. XM_015120078.2 → XP_014975564.1  protein TANC2 isoform X6

      UniProtKB/TrEMBL
      G7NJ72
      Conserved Domains (5) summary
      PHA03095
      Location:856 → 1150
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1250 → 1385
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG0666
      Location:1096 → 1222
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00006
      Location:1257 → 1282
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1100 → 1130
      ANK; ANK repeat [structural motif]

    6. XM_001116098.4 → XP_001116098.2  protein TANC2 isoform X7

      See identical proteins and their annotated locations for XP_001116098.2

      UniProtKB/TrEMBL
      G7NJ72
      Conserved Domains (6) summary
      COG0457
      Location:1240 → 1375
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG0666
      Location:804 → 972
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd00204
      Location:1094 → 1219
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00006
      Location:1247 → 1272
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1100 → 1130
      ANK; ANK repeat [structural motif]
      cl25764
      Location:1472 → 1628
      PAT1; Topoisomerase II-associated protein PAT1

    7. XM_015120076.2 → XP_014975562.1  protein TANC2 isoform X5

      UniProtKB/TrEMBL
      G7NJ72
      Conserved Domains (7) summary
      PHA03095
      Location:1012 → 1232
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1253 → 1388
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG0666
      Location:807 → 975
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00006
      Location:1260 → 1285
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1103 → 1133
      ANK; ANK repeat [structural motif]
      pfam09770
      Location:1485 → 1641
      PAT1; Topoisomerase II-associated protein PAT1
      pfam12796
      Location:1107 → 1199
      Ank_2; Ankyrin repeats (3 copies)

    8. XM_028836643.1 → XP_028692476.1  protein TANC2 isoform X5

      UniProtKB/TrEMBL
      G7NJ72
      Conserved Domains (7) summary
      PHA03095
      Location:1012 → 1232
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1253 → 1388
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG0666
      Location:807 → 975
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00006
      Location:1260 → 1285
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1103 → 1133
      ANK; ANK repeat [structural motif]
      pfam09770
      Location:1485 → 1641
      PAT1; Topoisomerase II-associated protein PAT1
      pfam12796
      Location:1107 → 1199
      Ank_2; Ankyrin repeats (3 copies)

    9. XM_028836644.1 → XP_028692477.1  protein TANC2 isoform X8

      UniProtKB/TrEMBL
      G7NJ72
      Conserved Domains (5) summary
      PHA03095
      Location:766 → 1060
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1160 → 1295
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      COG0666
      Location:1006 → 1132
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00006
      Location:1167 → 1192
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1010 → 1040
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.