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    HPS6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712574, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HPS6provided by VGNC
    Official Full Name
    HPS6 biogenesis of lysosomal organelles complex 2 subunit 3provided by VGNC
    Primary source
    VGNC:VGNC:73418
    See related
    Ensembl:ENSMMUG00000009374
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HPS6 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (102576765..102579385)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (97761264..97763884)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene armadillo like helical domain containing 3 Neighboring gene uncharacterized LOC107000257 Neighboring gene microRNA mir-7201 Neighboring gene LIM domain binding 1 Neighboring gene PPARG related coactivator 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in lysosome localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in melanocyte differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in organelle organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BLOC-2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BLOC-2 complex member HPS6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194529.2 → NP_001181458.2  BLOC-2 complex member HPS6

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000494
      UniProtKB/TrEMBL
      F7HF55, H9F3Y4
      Related
      ENSMMUP00000012276.3, ENSMMUT00000013097.4
      Conserved Domains (1) summary
      pfam15702
      Location:1 → 763
      HPS6; Hermansky-Pudlak syndrome 6 protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      102576765..102579385
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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