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    SCOC short coiled-coil protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698242, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SCOC
    Gene description
    short coiled-coil protein
    See related
    Ensembl:ENSMMUG00000053045
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SCOC in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (138229288..138273967)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (140404607..140449292)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene mastermind like transcriptional coactivator 3 Neighboring gene uncharacterized LOC106998509 Neighboring gene uncharacterized LOC114678404 Neighboring gene uncharacterized LOC106998510 Neighboring gene 60S ribosomal protein L14-like Neighboring gene uncharacterized LOC106998511 Neighboring gene calmegin Neighboring gene MGAT4 family member D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short coiled-coil protein A; short coiled-coil protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      138229288..138273967
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001089419.3 → XP_001089419.1  short coiled-coil protein

      See identical proteins and their annotated locations for XP_001089419.1

      UniProtKB/TrEMBL
      A0A1D5RBJ9, A0A5F8AE96
      Related
      ENSMMUP00000075286.1, ENSMMUT00000092628.1
      Conserved Domains (1) summary
      pfam10224
      Location:42 → 113
      DUF2205; Predicted coiled-coil protein (DUF2205)

    RNA

    1. XR_003729803.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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