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    PHTF2 putative homeodomain transcription factor 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693552, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PHTF2provided by VGNC
    Official Full Name
    putative homeodomain transcription factor 2provided by VGNC
    Primary source
    VGNC:VGNC:75796
    See related
    Ensembl:ENSMMUG00000009008
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PHTF2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (128271374..128429548, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (116449571..116608212, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 2 Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin-fold modifier-conjugating enzyme 1 pseudogene Neighboring gene uncharacterized LOC114676997 Neighboring gene farnesyl pyrophosphate synthase pseudogene Neighboring gene transmembrane protein 60 Neighboring gene round spermatid basic protein 1 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein PHTF2; putative homeodomain transcription factor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258132.1 → NP_001245061.1  protein PHTF2

      See identical proteins and their annotated locations for NP_001245061.1

      Status: PROVISIONAL

      Source sequence(s)
      JU476499
      UniProtKB/TrEMBL
      A0A1D5QGY8, F7DE36, I0FTM7
      Related
      ENSMMUP00000011801.4, ENSMMUT00000012587.4
      Conserved Domains (1) summary
      pfam12129
      Location:5 → 152
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      128271374..128429548 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844773.1 → XP_028700606.1  putative homeodomain transcription factor 2 isoform X7

      UniProtKB/TrEMBL
      A0A1D5QGY8, A0A5F8AMV7
      Related
      ENSMMUP00000079262.1, ENSMMUT00000084806.1
      Conserved Domains (1) summary
      pfam12129
      Location:5 → 154
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    2. XM_015134052.2 → XP_014989538.1  putative homeodomain transcription factor 2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QGY8, F7DE36, I0FTM7
      Conserved Domains (1) summary
      pfam12129
      Location:5 → 152
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    3. XM_028844771.1 → XP_028700604.1  putative homeodomain transcription factor 2 isoform X5

      UniProtKB/TrEMBL
      A0A1D5QGY8
      Related
      ENSMMUP00000011800.4, ENSMMUT00000012586.4
      Conserved Domains (1) summary
      pfam12129
      Location:5 → 156
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    4. XM_028844772.1 → XP_028700605.1  putative homeodomain transcription factor 2 isoform X6

      UniProtKB/TrEMBL
      A0A1D5QGY8
      Conserved Domains (1) summary
      pfam12129
      Location:5 → 156
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    5. XM_015134048.2 → XP_014989534.1  putative homeodomain transcription factor 2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QGY8, F7EGG0
      Conserved Domains (1) summary
      pfam12129
      Location:5 → 158
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    6. XM_028844768.1 → XP_028700601.1  putative homeodomain transcription factor 2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QGY8, F7DE36, I0FTM7
      Conserved Domains (1) summary
      pfam12129
      Location:5 → 152
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    7. XM_015134049.2 → XP_014989535.1  putative homeodomain transcription factor 2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QGY8, F7EGG0
      Related
      ENSMMUP00000011798.4, ENSMMUT00000012584.4
      Conserved Domains (1) summary
      pfam12129
      Location:5 → 158
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    8. XM_028844774.1 → XP_028700607.1  putative homeodomain transcription factor 2 isoform X8

      UniProtKB/TrEMBL
      A0A1D5QGY8
      Conserved Domains (1) summary
      pfam12129
      Location:1 → 15
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    9. XM_028844770.1 → XP_028700603.1  putative homeodomain transcription factor 2 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QGY8
      Conserved Domains (1) summary
      pfam12129
      Location:4 → 143
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    10. XM_028844769.1 → XP_028700602.1  putative homeodomain transcription factor 2 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QGY8
      Conserved Domains (1) summary
      pfam12129
      Location:4 → 147
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    11. XM_028844775.1 → XP_028700608.1  putative homeodomain transcription factor 2 isoform X8

      UniProtKB/TrEMBL
      A0A1D5QGY8
      Conserved Domains (1) summary
      pfam12129
      Location:1 → 15
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

    12. XM_028844776.1 → XP_028700609.1  putative homeodomain transcription factor 2 isoform X9

      Conserved Domains (1) summary
      pfam12129
      Location:5 → 152
      Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor
    Nucleotide Protein
    Heading Accession and Version

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