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    VPS36 vacuolar protein sorting 36 homolog [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693290, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VPS36provided by VGNC
    Official Full Name
    vacuolar protein sorting 36 homologprovided by VGNC
    Primary source
    VGNC:VGNC:79241
    See related
    Ensembl:ENSMMUG00000011360
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See VPS36 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (30876237..30912951, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (31753138..31789748, complement)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673575 Neighboring gene thrombospondin type 1 domain containing 1 Neighboring gene cytoskeleton associated protein 2 Neighboring gene ferritin heavy chain pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT II complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar protein-sorting-associated protein 36

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      30876237..30912951 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121137.2 → XP_014976623.2  vacuolar protein-sorting-associated protein 36 isoform X1

      UniProtKB/TrEMBL
      F7HET5, G7NK66, H9FV58
      Related
      ENSMMUP00000036246.2, ENSMMUT00000043237.3
      Conserved Domains (2) summary
      cd13226
      Location:1 → 128
      PH-GRAM-like_Eap45; Pleckstrin homology-like domain or GLUE (GRAM-like ubiquitin-binding in Eap45) domain of Eap45
      pfam04157
      Location:154 → 370
      EAP30; EAP30/Vps36 family

    2. XM_015121138.2 → XP_014976624.1  vacuolar protein-sorting-associated protein 36 isoform X2

      UniProtKB/TrEMBL
      G7NK66
      Conserved Domains (2) summary
      pfam04157
      Location:96 → 312
      EAP30; EAP30/Vps36 family
      cl17171
      Location:1 → 70
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

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