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    MAN2C1 mannosidase alpha class 2C member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705599, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MAN2C1provided by VGNC
    Official Full Name
    mannosidase alpha class 2C member 1provided by VGNC
    Primary source
    VGNC:VGNC:74485
    See related
    Ensembl:ENSMMUG00000009279
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MAN2C1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (52490685..52503219, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (52680669..52693543, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene COMM domain-containing protein 4 Neighboring gene nei like DNA glycosylase 1 Neighboring gene microRNA mir-631 Neighboring gene 60S ribosomal protein L13 pseudogene Neighboring gene SIN3 transcription regulator family member A Neighboring gene uncharacterized LOC114679456 Neighboring gene protein tyrosine phosphatase non-receptor type 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-mannosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mannose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oligosaccharide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-mannosidase 2C1
    XP_014998235.1
    XP_014998236.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      52490685..52503219 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142750.2 → XP_014998236.1  alpha-mannosidase 2C1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R2F7, H9F6Z6, I0FGW0
      Related
      ENSMMUP00000054492.2, ENSMMUT00000068302.2
      Conserved Domains (4) summary
      cd10813
      Location:252 → 503
      GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
      COG0383
      Location:72 → 1009
      AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
      pfam07748
      Location:622 → 1026
      Glyco_hydro_38C; Glycosyl hydrolases family 38 C-terminal domain
      pfam09261
      Location:517 → 596
      Alpha-mann_mid; Alpha mannosidase, middle domain

    2. XM_015142749.2 → XP_014998235.1  alpha-mannosidase 2C1 isoform X1

      UniProtKB/TrEMBL
      H9F6Z6
      Conserved Domains (4) summary
      cd10813
      Location:252 → 504
      GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
      COG0383
      Location:72 → 1010
      AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
      pfam07748
      Location:623 → 1027
      Glyco_hydro_38C; Glycosyl hydrolases family 38 C-terminal domain
      pfam09261
      Location:518 → 597
      Alpha-mann_mid; Alpha mannosidase, middle domain
    Nucleotide Protein
    Heading Accession and Version

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