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    SAMD8 sterile alpha motif domain containing 8 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704361, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SAMD8provided by VGNC
    Official Full Name
    sterile alpha motif domain containing 8provided by VGNC
    Primary source
    VGNC:VGNC:77109
    See related
    Ensembl:ENSMMUG00000008690
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SAMD8 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (62605658..62676950, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (57149156..57220619, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene catechol-O-methyltransferase domain containing 1 Neighboring gene voltage dependent anion channel 2 Neighboring gene dual specificity phosphatase 13B Neighboring gene peptidyl-prolyl cis-trans isomerase B1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ceramide cholinephosphotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sphingomyelin synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ceramide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sphingomyelin synthase-related protein 1
    XP_001096809.4
    XP_015002717.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      62605658..62676950 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001096809.4 → XP_001096809.4  sphingomyelin synthase-related protein 1 isoform X1

      UniProtKB/TrEMBL
      G7N241
      Conserved Domains (2) summary
      cd09515
      Location:72 → 140
      SAM_SGMS1-like; SAM domain of sphingomyelin synthase related subfamily
      pfam14360
      Location:355 → 428
      PAP2_C; PAP2 superfamily C-terminal

    2. XM_015147231.2 → XP_015002717.1  sphingomyelin synthase-related protein 1 isoform X2

      UniProtKB/TrEMBL
      F7EYM1, G7N241, H9EP29
      Related
      ENSMMUP00000011394.3, ENSMMUT00000012147.4
      Conserved Domains (2) summary
      cd09515
      Location:9 → 77
      SAM_SGMS1-like; SAM domain of sphingomyelin synthase related subfamily
      pfam14360
      Location:292 → 365
      PAP2_C; PAP2 superfamily C-terminal
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials