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    EDC4 enhancer of mRNA decapping 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701393, updated on 17-Aug-2024

    Summary

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    Official Symbol
    EDC4provided by VGNC
    Official Full Name
    enhancer of mRNA decapping 4provided by VGNC
    Primary source
    VGNC:VGNC:72058
    See related
    Ensembl:ENSMMUG00000011888
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See EDC4 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (55089822..55102069)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (52231474..52243750)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114674472 Neighboring gene THAP domain containing 11 Neighboring gene nuclear transport factor 2 Neighboring gene microRNA mir-1241 Neighboring gene neuritin 1 like Neighboring gene protein serine kinase H1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    enhancer of mRNA-decapping protein 4
    Names
    enhancer of mRNA-decapping protein 4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      55089822..55102069
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126437.2 → XP_014981923.1  enhancer of mRNA-decapping protein 4 isoform X1

      UniProtKB/TrEMBL
      F7HN31, H9FS95, I2CWS3
      Related
      ENSMMUP00000015608.3, ENSMMUT00000016663.4
      Conserved Domains (3) summary
      pfam16529
      Location:114 → 441
      Ge1_WD40; WD40 region of Ge1, enhancer of mRNA-decapping protein
      sd00039
      Location:180 → 219
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:260 → 409
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_015126438.2 → XP_014981924.1  enhancer of mRNA-decapping protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZFU7, H9FS95
      Related
      ENSMMUP00000064466.1, ENSMMUT00000088722.1
      Conserved Domains (3) summary
      pfam16529
      Location:46 → 373
      Ge1_WD40; WD40 region of Ge1, enhancer of mRNA-decapping protein
      sd00039
      Location:112 → 151
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:192 → 341
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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