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    CLASP1 cytoplasmic linker associated protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696719, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLASP1provided by VGNC
    Official Full Name
    cytoplasmic linker associated protein 1provided by VGNC
    Primary source
    VGNC:VGNC:71193
    See related
    Ensembl:ENSMMUG00000007499
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CLASP1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    49
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (9436315..9746183)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (9443195..9750634)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene nucleophosmin pseudogene Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene U4atac minor spliceosomal RNA Neighboring gene uncharacterized LOC114671304 Neighboring gene uncharacterized LOC114671305 Neighboring gene transcription factor CP2 like 1 Neighboring gene uncharacterized LOC114671501

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables kinetochore binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitotic spindle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule organizing center IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitotic spindle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CLIP-associating protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      9436315..9746183
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830633.1 → XP_028686466.1  CLIP-associating protein 1 isoform X2

      UniProtKB/TrEMBL
      G7NB30
      Conserved Domains (4) summary
      PHA03307
      Location:620 → 830
      PHA03307; transcriptional regulator ICP4; Provisional
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    2. XM_015109891.2 → XP_014965377.1  CLIP-associating protein 1 isoform X1

      UniProtKB/TrEMBL
      G7NB30
      Conserved Domains (4) summary
      PHA03307
      Location:620 → 830
      PHA03307; transcriptional regulator ICP4; Provisional
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    3. XM_015109907.2 → XP_014965393.1  CLIP-associating protein 1 isoform X18

      UniProtKB/TrEMBL
      A0A1D5QVR5
      Conserved Domains (4) summary
      PHA03307
      Location:624 → 821
      PHA03307; transcriptional regulator ICP4; Provisional
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    4. XM_015109895.2 → XP_014965381.1  CLIP-associating protein 1 isoform X5

      UniProtKB/TrEMBL
      F6QKC2, G7NB30
      Conserved Domains (3) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    5. XM_015109896.2 → XP_014965382.1  CLIP-associating protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A1D5QVR5
      Conserved Domains (3) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    6. XM_015109897.2 → XP_014965383.1  CLIP-associating protein 1 isoform X7

      UniProtKB/TrEMBL
      A0A1D5QVR5
      Conserved Domains (3) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    7. XM_028830636.1 → XP_028686469.1  CLIP-associating protein 1 isoform X17

      UniProtKB/TrEMBL
      G7NB30
      Conserved Domains (4) summary
      PHA03307
      Location:564 → 797
      PHA03307; transcriptional regulator ICP4; Provisional
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    8. XM_015109900.2 → XP_014965386.1  CLIP-associating protein 1 isoform X10

      UniProtKB/TrEMBL
      A0A1D5QVR5
      Related
      ENSMMUP00000053655.2, ENSMMUT00000059602.2
      Conserved Domains (4) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam11179
      Location:572 → 811
      DUF2967; Protein of unknown function (DUF2967)
      pfam12348
      Location:326 → 537
      CLASP_N; CLASP N terminal

    9. XM_015109898.2 → XP_014965384.1  CLIP-associating protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A1D5QVR5
      Conserved Domains (3) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    10. XM_015109892.2 → XP_014965378.1  CLIP-associating protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QVR5
      Conserved Domains (2) summary
      pfam12348
      Location:326 → 537
      CLASP_N; CLASP N terminal
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]

    11. XM_015109894.2 → XP_014965380.1  CLIP-associating protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QVR5
      Conserved Domains (2) summary
      pfam12348
      Location:326 → 537
      CLASP_N; CLASP N terminal
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]

    12. XM_015109902.2 → XP_014965388.1  CLIP-associating protein 1 isoform X12

      UniProtKB/TrEMBL
      A0A1D5QVR5
      Related
      ENSMMUP00000041738.2, ENSMMUT00000056022.2
      Conserved Domains (4) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam11179
      Location:572 → 723
      DUF2967; Protein of unknown function (DUF2967)
      pfam12348
      Location:326 → 537
      CLASP_N; CLASP N terminal

    13. XM_015109899.2 → XP_014965385.1  CLIP-associating protein 1 isoform X9

      UniProtKB/TrEMBL
      A0A1D5QVR5
      Conserved Domains (3) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    14. XM_015109901.2 → XP_014965387.1  CLIP-associating protein 1 isoform X11

      UniProtKB/TrEMBL
      A0A1D5QVR5, H9FRZ4
      Related
      ENSMMUP00000048784.2, ENSMMUT00000056343.2
      Conserved Domains (3) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    15. XM_015109903.2 → XP_014965389.1  CLIP-associating protein 1 isoform X13

      UniProtKB/TrEMBL
      A0A1D5QVR5, I0FQA8
      Related
      ENSMMUP00000002645.4, ENSMMUT00000002801.4
      Conserved Domains (3) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    16. XM_015109904.2 → XP_014965390.1  CLIP-associating protein 1 isoform X14

      UniProtKB/TrEMBL
      A0A1D5QVR5, I0FQA9
      Conserved Domains (3) summary
      sd00044
      Location:93 → 120
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:324 → 537
      CLASP_N; CLASP N terminal

    17. XM_015109905.2 → XP_014965391.1  CLIP-associating protein 1 isoform X15

      UniProtKB/TrEMBL
      A0A1D5QC67
      Conserved Domains (2) summary
      sd00044
      Location:993 → 1022
      HEAT; HEAT repeat [structural motif]
      pfam12348
      Location:95 → 306
      CLASP_N; CLASP N terminal

    18. XM_015109906.2 → XP_014965392.1  CLIP-associating protein 1 isoform X16

      UniProtKB/TrEMBL
      A0A1D5QC67
      Conserved Domains (2) summary
      sd00044
      Location:604 → 631
      HEAT; HEAT repeat [structural motif]
      pfam12348
      Location:92 → 305
      CLASP_N; CLASP N terminal
    Nucleotide Protein
    Heading Accession and Version

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