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    CACTIN cactin, spliceosome C complex subunit [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721737, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CACTINprovided by VGNC
    Official Full Name
    cactin, spliceosome C complex subunitprovided by VGNC
    Primary source
    VGNC:VGNC:108486
    See related
    Ensembl:ENSMMUG00000028931
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CACTIN in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (3499626..3516820, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (3629847..3646716, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene flocculation protein FLO11-like Neighboring gene thromboxane A2 receptor Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 gamma Neighboring gene uncharacterized LOC114674051 Neighboring gene 60S ribosomal protein L26 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA cis splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cactin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      3499626..3516820 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122463.2 → XP_014977949.2  cactin

      UniProtKB/TrEMBL
      F6YGQ7, I2CUR2
      Related
      ENSMMUP00000031971.3, ENSMMUT00000038889.3
      Conserved Domains (4) summary
      PTZ00266
      Location:216 → 274
      PTZ00266; NIMA-related protein kinase; Provisional
      cl19731
      Location:448 → 523
      SipA; Salmonella invasion protein A
      pfam09732
      Location:641 → 760
      CactinC_cactus; Cactus-binding C-terminus of cactin protein
      pfam10312
      Location:272 → 457
      Cactin_mid; Conserved mid region of cactin
    Nucleotide Protein
    Heading Accession and Version

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