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    LOC717463 zinc finger protein 442 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717463, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC717463
    Gene description
    zinc finger protein 442
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ZNF442
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    Genomic context

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    See LOC717463 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (12039040..12060850, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (12396527..12407753, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 709 Neighboring gene zinc finger protein 44 Neighboring gene zinc finger protein 563 Neighboring gene zinc finger protein 799 Neighboring gene zinc finger protein 709 Neighboring gene zinc finger protein 564

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 442

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      12039040..12060850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028839165.1 → XP_028694998.1  zinc finger protein 442 isoform X2

      Conserved Domains (3) summary
      COG5048
      Location:212 → 599
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:495 → 515
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:3 → 44
      KRAB; KRAB box

    2. XM_028839166.1 → XP_028694999.1  zinc finger protein 442 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:168 → 555
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:451 → 471
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_028839167.1 → XP_028695000.1  zinc finger protein 442 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:168 → 555
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:451 → 471
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_015123021.2 → XP_014978507.2  zinc finger protein 442 isoform X1

      Conserved Domains (3) summary
      COG5048
      Location:230 → 617
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:513 → 533
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:21 → 62
      KRAB; KRAB box

    5. XM_001108962.4 → XP_001108962.3  zinc finger protein 442 isoform X4

      Conserved Domains (3) summary
      COG5048
      Location:237 → 624
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:520 → 540
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:28 → 69
      KRAB; KRAB box
    Nucleotide Protein
    Heading Accession and Version

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