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    SMC1B structural maintenance of chromosomes 1B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713486, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SMC1Bprovided by VGNC
    Official Full Name
    structural maintenance of chromosomes 1Bprovided by VGNC
    Primary source
    VGNC:VGNC:77657
    See related
    Ensembl:ENSMMUG00000023004
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SMC1B in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (6087035..6150476)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (87493828..87557233, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene fibulin 1 Neighboring gene RIB43A domain with coiled-coils 2 Neighboring gene family with sequence similarity 118 member A Neighboring gene uroplakin 3A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cohesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    structural maintenance of chromosomes protein 1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      6087035..6150476
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001109647.3 → XP_001109647.2  structural maintenance of chromosomes protein 1B isoform X1

      UniProtKB/TrEMBL
      F6TI87, G7N470
      Related
      ENSMMUP00000030289.4, ENSMMUT00000032372.4
      Conserved Domains (1) summary
      COG1196
      Location:3 → 1219
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. XM_015150564.2 → XP_015006050.2  structural maintenance of chromosomes protein 1B isoform X2

      UniProtKB/TrEMBL
      G7N470
      Related
      ENSMMUP00000075503.1, ENSMMUT00000110172.1
      Conserved Domains (1) summary
      COG1196
      Location:3 → 1200
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. XM_028827601.1 → XP_028683434.1  structural maintenance of chromosomes protein 1B isoform X3

      UniProtKB/TrEMBL
      G7N470
      Conserved Domains (1) summary
      COG1196
      Location:3 → 1157
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    RNA

    1. XR_001447821.2 RNA Sequence

    2. XR_001447822.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials