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    ATP13A2 ATPase cation transporting 13A2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699678, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATP13A2provided by VGNC
    Official Full Name
    ATPase cation transporting 13A2provided by VGNC
    Primary source
    VGNC:VGNC:70155
    See related
    Ensembl:ENSMMUG00000001610
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATP13A2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (207752376..207779544)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (15681783..15709180, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene peptidyl arginine deiminase 2 Neighboring gene succinate dehydrogenase complex iron sulfur subunit B Neighboring gene microfibril associated protein 2 Neighboring gene ciliary rootlet coiled-coil, rootletin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATPase-coupled monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables P-type ion transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagosome-lysosome fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of autophagosome size IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mitochondrion organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cation-transporting ATPase 13A2
    Names
    ATPase 13A2
    putative cation-transporting ATPase 13A2
    XP_001087415.1
    XP_001087655.2
    XP_014979400.1
    XP_014979527.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      207752376..207779544
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015124041.2 → XP_014979527.1  cation-transporting ATPase 13A2 isoform X3

      UniProtKB/TrEMBL
      F7GUW3, G7MH53
      Related
      ENSMMUP00000002159.2, ENSMMUT00000002283.4
      Conserved Domains (5) summary
      COG4087
      Location:845 → 894
      COG4087; Soluble P-type ATPase [General function prediction only]
      TIGR01657
      Location:39 → 1118
      P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
      pfam00122
      Location:258 → 493
      E1-E2_ATPase; E1-E2 ATPase
      pfam12409
      Location:39 → 114
      P5-ATPase; P5-type ATPase cation transporter
      pfam13246
      Location:623 → 659
      Cation_ATPase; Cation transport ATPase (P-type)

    2. XM_015123914.2 → XP_014979400.1  cation-transporting ATPase 13A2 isoform X1

      UniProtKB/TrEMBL
      F7GUW9, F7GUX5, H9FS22
      Related
      ENSMMUP00000002153.4, ENSMMUT00000002277.4
      Conserved Domains (5) summary
      COG4087
      Location:845 → 894
      COG4087; Soluble P-type ATPase [General function prediction only]
      TIGR01657
      Location:39 → 1073
      P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
      pfam00122
      Location:258 → 493
      E1-E2_ATPase; E1-E2 ATPase
      pfam12409
      Location:39 → 114
      P5-ATPase; P5-type ATPase cation transporter
      pfam13246
      Location:623 → 659
      Cation_ATPase; Cation transport ATPase (P-type)

    3. XM_001087415.4 → XP_001087415.1  cation-transporting ATPase 13A2 isoform X4

      See identical proteins and their annotated locations for XP_001087415.1

      UniProtKB/TrEMBL
      F7GUW9
      Related
      ENSMMUP00000002156.4, ENSMMUT00000002280.4
      Conserved Domains (5) summary
      COG4087
      Location:806 → 855
      COG4087; Soluble P-type ATPase [General function prediction only]
      TIGR01657
      Location:39 → 1034
      P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
      pfam00122
      Location:258 → 493
      E1-E2_ATPase; E1-E2 ATPase
      pfam12409
      Location:39 → 114
      P5-ATPase; P5-type ATPase cation transporter
      pfam13246
      Location:623 → 659
      Cation_ATPase; Cation transport ATPase (P-type)

    4. XM_001087655.4 → XP_001087655.2  cation-transporting ATPase 13A2 isoform X2

      See identical proteins and their annotated locations for XP_001087655.2

      UniProtKB/TrEMBL
      G7MH53
      Conserved Domains (5) summary
      COG4087
      Location:849 → 898
      COG4087; Soluble P-type ATPase [General function prediction only]
      TIGR01657
      Location:39 → 1122
      P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
      pfam00122
      Location:262 → 497
      E1-E2_ATPase; E1-E2 ATPase
      pfam12409
      Location:39 → 114
      P5-ATPase; P5-type ATPase cation transporter
      pfam13246
      Location:627 → 663
      Cation_ATPase; Cation transport ATPase (P-type)
    Nucleotide Protein
    Heading Accession and Version

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