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    KHDC1 KH domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715576, updated on 14-Nov-2024

    Summary

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    Gene symbol
    KHDC1
    Gene description
    KH domain containing 1
    See related
    Ensembl:ENSMMUG00000051247
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See KHDC1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (99625192..99702374)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (71261012..71330570, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene developmental pluripotency associated 5 Neighboring gene multifunctional protein ADE2 pseudogene Neighboring gene eukaryotic translation initiation factor 3 subunit E pseudogene Neighboring gene uncharacterized LOC114669785 Neighboring gene uncharacterized LOC114677567 Neighboring gene endogenous retrovirus group K member 25 Env polyprotein-like Neighboring gene uncharacterized LOC715616 Neighboring gene KH domain containing 1 like Neighboring gene KH homology domain-containing protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    KH homology domain-containing protein 1
    Names
    KH homology domain containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257908.1 → NP_001244837.1  KH homology domain-containing protein 1

      See identical proteins and their annotated locations for NP_001244837.1

      Status: PROVISIONAL

      Source sequence(s)
      JU322420
      UniProtKB/TrEMBL
      F6YFX7, F6YLS6, I0FKJ5
      Related
      ENSMMUP00000071358.1, ENSMMUT00000087836.1
      Conserved Domains (1) summary
      cd12795
      Location:1 → 108
      FILIA_N_like; FILIA-N KH-like domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      99625192..99702374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015136732.2 → XP_014992218.1  KH homology domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      F6YFX7, F6YLS6, I0FKJ5
      Related
      ENSMMUP00000024429.4, ENSMMUT00000026106.4
      Conserved Domains (1) summary
      cd12795
      Location:1 → 108
      FILIA_N_like; FILIA-N KH-like domain

    2. XM_015136730.2 → XP_014992216.2  KH homology domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      cd12795
      Location:62 → 174
      FILIA_N_like; FILIA-N KH-like domain

    3. XM_015136731.2 → XP_014992217.1  KH homology domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      F6YFX7, F6YLS6, I0FKJ5
      Conserved Domains (1) summary
      cd12795
      Location:1 → 108
      FILIA_N_like; FILIA-N KH-like domain
    Nucleotide Protein
    Heading Accession and Version

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