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    TRAPPC3 trafficking protein particle complex subunit 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713705, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRAPPC3provided by VGNC
    Official Full Name
    trafficking protein particle complex subunit 3provided by VGNC
    Primary source
    VGNC:VGNC:79210
    Locus tag
    EGK_00557
    See related
    Ensembl:ENSMMUG00000022499
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRAPPC3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (188446432..188458746)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (35326444..35339477, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene thyroid hormone receptor associated protein 3 Neighboring gene MAP7 domain containing 1 Neighboring gene collagen type VIII alpha 2 chain Neighboring gene ADP-ribosylserine hydrolase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cis-Golgi network membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking protein particle complex subunit 3
    Names
    trafficking protein particle complex 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266767.2 → NP_001253696.1  trafficking protein particle complex subunit 3

      See identical proteins and their annotated locations for NP_001253696.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045481
      UniProtKB/TrEMBL
      A0A1D5Q8B3, A0A1D5QPN9, A0A8J8XK89, G7MFV8
      Related
      ENSMMUP00000044281.1, ENSMMUT00000065063.2
      Conserved Domains (1) summary
      cd14942
      Location:15 → 169
      TRAPPC3_bet3; Bet3-TRAPPC3 subunit of the TRAPP complex

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      188446432..188458746
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135124.2 → XP_014990610.1  trafficking protein particle complex subunit 3 isoform X1

      Conserved Domains (1) summary
      cd14942
      Location:1 → 123
      TRAPPC3_bet3; Bet3-TRAPPC3 subunit of the TRAPP complex

    2. XM_015135130.2 → XP_014990616.1  trafficking protein particle complex subunit 3 isoform X1

      Conserved Domains (1) summary
      cd14942
      Location:1 → 123
      TRAPPC3_bet3; Bet3-TRAPPC3 subunit of the TRAPP complex
    Nucleotide Protein
    Heading Accession and Version

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