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    SNX25 sorting nexin 25 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699548, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNX25provided by VGNC
    Official Full Name
    sorting nexin 25provided by VGNC
    Primary source
    VGNC:VGNC:77757
    See related
    Ensembl:ENSMMUG00000003518
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SNX25 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (182515389..182659719)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (185661243..185808287)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 4 Neighboring gene uncharacterized LOC106998608 Neighboring gene cilia and flagella associated protein 97 Neighboring gene U2 spliceosomal RNA Neighboring gene LRP2 binding protein Neighboring gene ankyrin repeat domain 37 Neighboring gene UFM1 specific peptidase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-25

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      182515389..182659719
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139609.2 → XP_014995095.2  sorting nexin-25

      UniProtKB/TrEMBL
      A0A1D5QDT9
      Related
      ENSMMUP00000034465.3, ENSMMUT00000041434.3
      Conserved Domains (4) summary
      cd06878
      Location:665 → 787
      PX_SNX25; The phosphoinositide binding Phox Homology domain of Sorting Nexin 25
      cd08720
      Location:454 → 562
      RGS_SNX25; Regulator of G protein signaling (RGS) domain found in the Sorting Nexin 25 (SNX25) protein
      pfam02194
      Location:165 → 320
      PXA; PXA domain
      pfam08628
      Location:864 → 970
      Nexin_C; Sorting nexin C terminal
    Nucleotide Protein
    Heading Accession and Version

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