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    Etd embryonic testis differentiation [ Mus musculus (house mouse) ]

    Gene ID: 69501, updated on 27-Nov-2024

    Summary

    Official Symbol
    Etdprovided by MGI
    Official Full Name
    embryonic testis differentiationprovided by MGI
    Primary source
    MGI:MGI:1916751
    See related
    Ensembl:ENSMUSG00000060967 AllianceGenome:MGI:1916751
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700030K02Rik
    Summary
    Is expressed in ovary; primary sex cord; and testis. Orthologous to several human genes including ETDA (embryonic testis differentiation homolog A) and ETDB (embryonic testis differentiation homolog B). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 5.2) See more
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    Genomic context

    See Etd in Genome Data Viewer
    Location:
    X A5; X 29.64 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (52523795..52532453)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (53434918..53443576)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene motile sperm domain containing 1 Neighboring gene casein kinase 1, gamma 3 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47193 Neighboring gene golgin subfamily A member 6-like protein 22 Neighboring gene RIKEN cDNA 4933416I08 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    embryonic testis differentiation protein
    Names
    embryonic testis differentiation-associated

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175147.2NP_780356.1  embryonic testis differentiation protein

      Status: VALIDATED

      Source sequence(s)
      AY134667
      UniProtKB/Swiss-Prot
      Q80SW5
      Related
      ENSMUSP00000073854.7, ENSMUST00000074232.7

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      52523795..52532453
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)