U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Vmn1r21 vomeronasal 1 receptor 21 [ Mus musculus (house mouse) ]

    Gene ID: 171201, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vmn1r21provided by MGI
    Official Full Name
    vomeronasal 1 receptor 21provided by MGI
    Primary source
    MGI:MGI:2159464
    See related
    Ensembl:ENSMUSG00000115343 AllianceGenome:MGI:2159464
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1rc28
    Summary
    Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Vmn1r21 in Genome Data Viewer
    Location:
    6 B3; 6 27.82 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (57820549..57821442, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (57843564..57844457, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene LanC (bacterial lantibiotic synthetase component C)-like 2 Neighboring gene vesicular, overexpressed in cancer, prosurvival protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E9272 Neighboring gene predicted gene, 25726 Neighboring gene vomeronasal 1 receptor, pseudogene 12

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables pheromone receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to pheromone ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    vomeronasal 1 receptor 21
    Names
    vomernasal 1 receptor Vmn1r21
    vomeronasal 1 receptor, C28
    vomeronasal type 1 receptor C28

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134183.1NP_598944.1  vomeronasal 1 receptor 21

      See identical proteins and their annotated locations for NP_598944.1

      Status: PROVISIONAL

      Source sequence(s)
      AY065484
      Consensus CDS
      CCDS20186.1
      UniProtKB/TrEMBL
      A0A0N4SV70, A0A0N4SW70, F6MAV8, F6MAW1, Q8R2C6
      Related
      ENSMUSP00000154295.2, ENSMUST00000226191.2
      Conserved Domains (1) summary
      pfam03402
      Location:33293
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      57820549..57821442 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)