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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001164226.2 → NP_001157698.1 nuclear respiratory factor 1 isoform a
See identical proteins and their annotated locations for NP_001157698.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform a. Variants 1, 6, 9, and 10 all encode the same isoform (a).
- Source sequence(s)
-
AC134897, AC153632
- Consensus CDS
-
CCDS19968.1
- UniProtKB/Swiss-Prot
- Q9CXE4, Q9WU00
- UniProtKB/TrEMBL
-
Q8C4C0
- Related
- ENSMUSP00000110866.2, ENSMUST00000115211.8
- Conserved Domains (2) summary
-
- pfam10492
Location:450 → 493
- Nrf1_activ_bdg; Nrf1 activator activation site binding domain
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
NM_001164227.2 → NP_001157699.1 nuclear respiratory factor 1 isoform b
See identical proteins and their annotated locations for NP_001157699.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains an alternate exon in the 3' coding region which results in a frameshift and early stop codon, compared to variant 1. This results in a distinct and longer C-terminus in isoform b, compared to isoform a. Variants 2, 7, 13, and 14 all encode the same isoform (b).
- Source sequence(s)
-
AC134897, AC153632
- Consensus CDS
-
CCDS51741.1
- UniProtKB/TrEMBL
- Q8CAV3, Q99K73
- Related
- ENSMUSP00000110860.2, ENSMUST00000115206.8
- Conserved Domains (2) summary
-
- cd04867
Location:450 → 525
- TGS_YchF_OLA1; TGS (ThrRS, GTPase and SpoT) domain found in the YchF/OLA1 family proteins
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
NM_001164228.2 → NP_001157700.1 nuclear respiratory factor 1 isoform c
See identical proteins and their annotated locations for NP_001157700.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 5' UTR, lacks a 3' coding exon, and contains an alternate exon in the 3' coding region which results in a frameshift and early stop codon, compared to variant 1. This results in a distinct and shorter C-terminus in isoform c, compared to isoform a.
- Source sequence(s)
-
AC134897, AC153632
- Consensus CDS
-
CCDS51742.1
- UniProtKB/TrEMBL
- D3Z3B4, G3XA39
- Related
- ENSMUSP00000110858.2, ENSMUST00000115204.8
- Conserved Domains (1) summary
-
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
NM_001164229.2 → NP_001157701.1 nuclear respiratory factor 1 isoform d
See identical proteins and their annotated locations for NP_001157701.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains an alternate exon in the 5' UTR, contains an alternate 5' coding exon, and contains an alternate exon in the 3' coding region which results in a frameshift and early stop codon, compared to variant 1. This results in a distinct and longer C-terminus in isoform d, compared to isoform a. Variants 4 and 15 both encode the same isoform (d).
- Source sequence(s)
-
AC134897, AC153632
- Consensus CDS
-
CCDS51739.1
- UniProtKB/TrEMBL
- Q3UXF4, Q3UYQ3
- Related
- ENSMUSP00000110853.2, ENSMUST00000115199.8
- Conserved Domains (1) summary
-
- pfam10491
Location:87 → 295
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
NM_001164230.2 → NP_001157702.1 nuclear respiratory factor 1 isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate splice site in the 5' UTR and contains an alternate exon in the 3' coding region which results in a frameshift and early stop codon, compared to variant 1. This results in a distinct and shorter C-terminus in isoform e, compared to isoform a. Variants 5 and 16 both encode the same isoform (e).
- Source sequence(s)
-
AC134897, AC153632
- Consensus CDS
-
CCDS51740.1
- UniProtKB/TrEMBL
- E9Q7X0, Q3UYQ3
- Related
- ENSMUSP00000110854.2, ENSMUST00000115200.8
- Conserved Domains (1) summary
-
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
NM_001361692.2 → NP_001348621.1 nuclear respiratory factor 1 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC153632
- Consensus CDS
-
CCDS51741.1
- UniProtKB/TrEMBL
- Q8CAV3, Q99K73
- Conserved Domains (2) summary
-
- cd04867
Location:450 → 525
- TGS_YchF_OLA1; TGS (ThrRS, GTPase and SpoT) domain found in the YchF/OLA1 family proteins
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
NM_001361693.2 → NP_001348622.1 nuclear respiratory factor 1 isoform f
Status: VALIDATED
- Source sequence(s)
-
AC153632
- UniProtKB/TrEMBL
-
Q8C4C0
- Conserved Domains (2) summary
-
- pfam10492
Location:462 → 505
- Nrf1_activ_bdg; Nrf1 activator activation site binding domain
- pfam10491
Location:87 → 295
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
NM_001361694.2 → NP_001348623.1 nuclear respiratory factor 1 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC153632
- Consensus CDS
-
CCDS19968.1
- UniProtKB/Swiss-Prot
- Q9CXE4, Q9WU00
- UniProtKB/TrEMBL
-
Q8C4C0
- Conserved Domains (2) summary
-
- pfam10492
Location:450 → 493
- Nrf1_activ_bdg; Nrf1 activator activation site binding domain
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
NM_001361695.2 → NP_001348624.1 nuclear respiratory factor 1 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC153632
- Consensus CDS
-
CCDS19968.1
- UniProtKB/Swiss-Prot
- Q9CXE4, Q9WU00
- UniProtKB/TrEMBL
-
Q8C4C0
- Conserved Domains (2) summary
-
- pfam10492
Location:450 → 493
- Nrf1_activ_bdg; Nrf1 activator activation site binding domain
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
NM_001410221.1 → NP_001397150.1 nuclear respiratory factor 1 isoform g
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
Q8CAV3
-
NM_001410222.1 → NP_001397151.1 nuclear respiratory factor 1 isoform g
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
Q8CAV3
-
NM_001410223.1 → NP_001397152.1 nuclear respiratory factor 1 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
- Q8CAV3, Q99K73
-
NM_001410224.1 → NP_001397153.1 nuclear respiratory factor 1 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC153632
- UniProtKB/TrEMBL
- Q8CAV3, Q99K73
-
NM_001410225.1 → NP_001397154.1 nuclear respiratory factor 1 isoform d
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
- Q3UXF4, Q3UYQ3
- Related
- ENSMUSP00000067447.9, ENSMUST00000069831.15
-
NM_001410226.1 → NP_001397155.1 nuclear respiratory factor 1 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
- E9Q7X0, Q3UYQ3
- Related
- ENSMUSP00000004761.7, ENSMUST00000004761.13
-
NM_001410227.1 → NP_001397156.1 nuclear respiratory factor 1 isoform f
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
Q8C4C0
-
NM_001410228.1 → NP_001397157.1 nuclear respiratory factor 1 isoform f
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
Q8C4C0
-
NM_001410229.1 → NP_001397158.1 nuclear respiratory factor 1 isoform h
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
D3Z3B4
-
NM_001410230.1 → NP_001397159.1 nuclear respiratory factor 1 isoform h
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
D3Z3B4
-
NM_001410231.1 → NP_001397160.1 nuclear respiratory factor 1 isoform i
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
D3Z3B4
- Related
- ENSMUSP00000110863.2, ENSMUST00000115208.8
-
NM_001410232.1 → NP_001397161.1 nuclear respiratory factor 1 isoform j
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
D3Z3B4
-
NM_001410233.1 → NP_001397162.1 nuclear respiratory factor 1 isoform j
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
D3Z3B4
-
NM_001410234.1 → NP_001397163.1 nuclear respiratory factor 1 isoform k
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
D3Z3B4
-
NM_001410235.1 → NP_001397164.1 nuclear respiratory factor 1 isoform k
Status: VALIDATED
- Source sequence(s)
-
AC134897, AC153632
- UniProtKB/TrEMBL
-
D3Z3B4
-
NM_010938.5 → NP_035068.3 nuclear respiratory factor 1 isoform a
See identical proteins and their annotated locations for NP_035068.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) uses an alternate splice site in the 5' UTR, compared to variant 1. Variants 1, 6, 9, and 10 all encode the same isoform (a).
- Source sequence(s)
-
AC134897, AC153632
- Consensus CDS
-
CCDS19968.1
- UniProtKB/Swiss-Prot
- Q9CXE4, Q9WU00
- UniProtKB/TrEMBL
-
Q8C4C0
- Related
- ENSMUSP00000110867.2, ENSMUST00000115212.8
- Conserved Domains (2) summary
-
- pfam10492
Location:450 → 493
- Nrf1_activ_bdg; Nrf1 activator activation site binding domain
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000072.7 Reference GRCm39 C57BL/6J
- Range
-
30047984..30153462
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030255218.2 → XP_030111078.1 nuclear respiratory factor 1 isoform X4
- UniProtKB/Swiss-Prot
- Q9CXE4, Q9WU00
- UniProtKB/TrEMBL
-
Q8C4C0
- Conserved Domains (2) summary
-
- pfam10492
Location:450 → 493
- Nrf1_activ_bdg; Nrf1 activator activation site binding domain
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
XM_017321441.3 → XP_017176930.1 nuclear respiratory factor 1 isoform X2
- UniProtKB/TrEMBL
- Q8CAV3, Q99K73
- Conserved Domains (2) summary
-
- cd04867
Location:450 → 525
- TGS_YchF_OLA1; TGS (ThrRS, GTPase and SpoT) domain found in the YchF/OLA1 family proteins
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
XM_030255217.2 → XP_030111077.1 nuclear respiratory factor 1 isoform X2
- UniProtKB/TrEMBL
- Q8CAV3, Q99K73
- Related
- ENSMUSP00000065568.7, ENSMUST00000069808.13
- Conserved Domains (2) summary
-
- cd04867
Location:450 → 525
- TGS_YchF_OLA1; TGS (ThrRS, GTPase and SpoT) domain found in the YchF/OLA1 family proteins
- pfam10491
Location:87 → 283
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
XM_017321440.3 → XP_017176929.1 nuclear respiratory factor 1 isoform X1
- UniProtKB/TrEMBL
-
Q8CAV3
- Conserved Domains (2) summary
-
- cd04867
Location:462 → 537
- TGS_YchF_OLA1; TGS (ThrRS, GTPase and SpoT) domain found in the YchF/OLA1 family proteins
- pfam10491
Location:87 → 295
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1
-
XM_011241046.4 → XP_011239348.1 nuclear respiratory factor 1 isoform X1
See identical proteins and their annotated locations for XP_011239348.1
- UniProtKB/TrEMBL
-
Q8CAV3
- Conserved Domains (2) summary
-
- cd04867
Location:462 → 537
- TGS_YchF_OLA1; TGS (ThrRS, GTPase and SpoT) domain found in the YchF/OLA1 family proteins
- pfam10491
Location:87 → 295
- Nrf1_DNA-bind; NLS-binding and DNA-binding and dimerization domains of Nrf1