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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001161722.2 → NP_001155194.1 transcription factor EB
See identical proteins and their annotated locations for NP_001155194.1
Status: VALIDATED
- Source sequence(s)
-
AC113536, AC124830
- Consensus CDS
-
CCDS50133.1
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
-
Q3U327
- Related
- ENSMUSP00000084151.4, ENSMUST00000086932.10
- Conserved Domains (3) summary
-
- pfam11851
Location:320 → 472
- DUF3371; Domain of unknown function (DUF3371)
- pfam15951
Location:4 → 161
- MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus
- cd18927
Location:225 → 315
- bHLHzip_TFEB; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor EB (TFEB) and similar proteins
-
NM_001161723.2 → NP_001155195.1 transcription factor EB
See identical proteins and their annotated locations for NP_001155195.1
Status: VALIDATED
- Source sequence(s)
-
AC113536, AC124830
- Consensus CDS
-
CCDS50133.1
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
-
Q3U327
- Related
- ENSMUSP00000108913.2, ENSMUST00000113288.8
- Conserved Domains (3) summary
-
- pfam11851
Location:320 → 472
- DUF3371; Domain of unknown function (DUF3371)
- pfam15951
Location:4 → 161
- MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus
- cd18927
Location:225 → 315
- bHLHzip_TFEB; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor EB (TFEB) and similar proteins
-
NM_001432178.1 → NP_001419107.1 transcription factor EB
Status: VALIDATED
- Source sequence(s)
-
AC113536, AC124830
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
-
Q3U327
-
NM_001432179.1 → NP_001419108.1 transcription factor EB
Status: VALIDATED
- Source sequence(s)
-
AC113536, AC124830
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
-
Q3U327
-
NM_001432180.1 → NP_001419109.1 transcription factor EB
Status: VALIDATED
- Source sequence(s)
-
AC113536, AC124830
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
-
Q3U327
-
NM_001432181.1 → NP_001419110.1 transcription factor EB
Status: VALIDATED
- Source sequence(s)
-
AC113536, AC124830
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
-
Q3U327
-
NM_011549.4 → NP_035679.4 transcription factor EB
Status: VALIDATED
- Source sequence(s)
-
AC113536
- Consensus CDS
-
CCDS28856.1
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
-
Q3U327
- Related
- ENSMUSP00000024786.8, ENSMUST00000024786.14
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000083.7 Reference GRCm39 C57BL/6J
- Range
-
48047962..48103341
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006524007.5 → XP_006524070.1 transcription factor EB isoform X1
- Conserved Domains (3) summary
-
- pfam11851
Location:320 → 472
- DUF3371; Domain of unknown function (DUF3371)
- pfam15951
Location:4 → 161
- MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus
- cd18927
Location:225 → 315
- bHLHzip_TFEB; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor EB (TFEB) and similar proteins
-
XM_006524006.4 → XP_006524069.1 transcription factor EB isoform X1
- Conserved Domains (3) summary
-
- pfam11851
Location:320 → 472
- DUF3371; Domain of unknown function (DUF3371)
- pfam15951
Location:4 → 161
- MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus
- cd18927
Location:225 → 315
- bHLHzip_TFEB; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor EB (TFEB) and similar proteins
-
XM_006524004.1 → XP_006524067.1 transcription factor EB isoform X2
- UniProtKB/TrEMBL
-
Q3U327
- Conserved Domains (3) summary
-
- pfam11851
Location:355 → 507
- DUF3371; Domain of unknown function (DUF3371)
- pfam15951
Location:39 → 196
- MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus
- cd18927
Location:260 → 350
- bHLHzip_TFEB; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor EB (TFEB) and similar proteins
-
XM_006524003.4 → XP_006524066.2 transcription factor EB isoform X1
See identical proteins and their annotated locations for XP_006524066.2
- UniProtKB/Swiss-Prot
-
Q9R210
- UniProtKB/TrEMBL
-
Q3U327
- Conserved Domains (3) summary
-
- pfam11851
Location:320 → 472
- DUF3371; Domain of unknown function (DUF3371)
- pfam15951
Location:4 → 161
- MITF_TFEB_C_3_N; MITF/TFEB/TFEC/TFE3 N-terminus
- cd18927
Location:225 → 315
- bHLHzip_TFEB; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in transcription factor EB (TFEB) and similar proteins