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    TRIM8 tripartite motif containing 8 [ Bos taurus (domestic cattle) ]

    Gene ID: 782444, updated on 27-Dec-2024

    Summary

    Official Symbol
    TRIM8provided by VGNC
    Official Full Name
    tripartite motif containing 8provided by VGNC
    Primary source
    VGNC:VGNC:36352
    See related
    Ensembl:ENSBTAG00000021071
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See TRIM8 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (23263628..23279452)

    Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene actin related protein 1A Neighboring gene SUFU negative regulator of hedgehog signaling Neighboring gene uncharacterized LOC132343954 Neighboring gene uncharacterized LOC132343953 Neighboring gene ADP ribosylation factor like GTPase 3 Neighboring gene sideroflexin 2 Neighboring gene microRNA mir-2392

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General protein information

    Preferred Names
    E3 ubiquitin-protein ligase TRIM8
    NP_001178405.1
    XP_059737947.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191476.2NP_001178405.1  E3 ubiquitin-protein ligase TRIM8

      See identical proteins and their annotated locations for NP_001178405.1

      Status: VALIDATED

      Source sequence(s)
      EV635295, NKLS02000026
      UniProtKB/TrEMBL
      A0A3Q1M196, E1BJC6
      Related
      ENSBTAP00000061810.1, ENSBTAT00000083089.1
      Conserved Domains (4) summary
      PRK12704
      Location:181280
      PRK12704; phosphodiesterase; Provisional
      cd16580
      Location:1356
      RING-HC_TRIM8_C-V; RING finger, HC subclass, found in tripartite motif-containing protein 8 (TRIM8) and similar proteins
      cd19763
      Location:142183
      Bbox2_TRIM8_C-V; B-box-type 2 zinc finger found in tripartite motif-containing protein 8 (TRIM8) and similar proteins
      cd19838
      Location:90137
      Bbox1_TRIM8_C-V; B-box-type 1 zinc finger found in tripartite motif-containing protein 8 (TRIM8) and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      23263628..23279452
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059881964.1XP_059737947.1  E3 ubiquitin-protein ligase TRIM8 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M196, E1BJC6