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    CWF19L1 CWF19 like cell cycle control factor 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 506212, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CWF19L1provided by VGNC
    Official Full Name
    CWF19 like cell cycle control factor 1provided by VGNC
    Primary source
    VGNC:VGNC:57313
    See related
    BGD:BT27470; Ensembl:ENSBTAG00000007594
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CWF19L1 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (21141541..21165979, complement)

    Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene ER lipid raft associated 1 Neighboring gene component of inhibitor of nuclear factor kappa B kinase complex Neighboring gene small nucleolar RNA SNORA12 Neighboring gene centromere protein N Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 2 Neighboring gene polycystin 2 like 1, transient receptor potential cation channel

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA lariat debranching enzyme activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of post-mRNA release spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CWF19-like protein 1
    Names
    CWF19 like 1, cell cycle control

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192085.1 → NP_001179014.1  CWF19-like protein 1

      See identical proteins and their annotated locations for NP_001179014.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000026
      UniProtKB/TrEMBL
      E1BG07
      Related
      ENSBTAP00000009988.6, ENSBTAT00000009988.7
      Conserved Domains (3) summary
      cd07380
      Location:9 → 229
      MPP_CWF19_N; Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain
      pfam04676
      Location:447 → 535
      CwfJ_C_2; Protein similar to CwfJ C-terminus 2
      cl00228
      Location:328 → 426
      HIT_like; HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides. On the basis ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      21141541..21165979 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059881803.1 → XP_059737786.1  CWF19-like protein 1 isoform X2

    2. XM_059881800.1 → XP_059737783.1  CWF19-like protein 1 isoform X1

    3. XM_059881801.1 → XP_059737784.1  CWF19-like protein 1 isoform X1

    4. XM_015460644.3 → XP_015316130.1  CWF19-like protein 1 isoform X1

      Conserved Domains (3) summary
      cd07380
      Location:9 → 91
      MPP_CWF19_N; Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain
      pfam04676
      Location:309 → 397
      CwfJ_C_2; Protein similar to CwfJ C-terminus 2
      cl00228
      Location:190 → 288
      HIT_like; HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides. On the basis ...

    5. XM_059881802.1 → XP_059737785.1  CWF19-like protein 1 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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