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    RWDD1 RWD domain containing 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 541216, updated on 30-Jan-2025

    Summary

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    Official Symbol
    RWDD1provided by VGNC
    Official Full Name
    RWD domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:34225
    See related
    BGD:BT19072; EnsemblRapid:ENSBTAG00070005167
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RWDD1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (34136376..34154113, complement)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 230 Neighboring gene sulfotransferase family, cytosolic, 1C, member 4 Neighboring gene calcium homeostasis modulator family member 4 Neighboring gene trafficking protein particle complex subunit 3L Neighboring gene calcium homeostasis modulator family member 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC128296

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RWD domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034726.2 → NP_001029898.1  RWD domain-containing protein 1

      See identical proteins and their annotated locations for NP_001029898.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102910
      UniProtKB/TrEMBL
      F1MRI1, Q3ZC53
      Related
      ENSBTAP00070006679.1, ENSBTAT00070011820.1
      Conserved Domains (2) summary
      pfam05773
      Location:6 → 111
      RWD; RWD domain
      pfam16543
      Location:144 → 197
      DFRP_C; DRG Family Regulatory Proteins, Tma46

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      34136376..34154113 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015472802.3 → XP_015328288.1  RWD domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      pfam16543
      Location:48 → 101
      DFRP_C; DRG Family Regulatory Proteins, Tma46

    2. XM_010808411.4 → XP_010806713.1  RWD domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_010806713.1

      Conserved Domains (1) summary
      pfam16543
      Location:48 → 101
      DFRP_C; DRG Family Regulatory Proteins, Tma46
    Nucleotide Protein Strain
    Heading Accession and Version

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