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    FAU FAU ubiquitin like and ribosomal protein S30 fusion [ Bos taurus (domestic cattle) ]

    Gene ID: 282847, updated on 27-Dec-2024

    Summary

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    Gene symbol
    FAU
    Gene description
    FAU ubiquitin like and ribosomal protein S30 fusion
    See related
    BGD:BT28660; Ensembl:ENSBTAG00000020807
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See FAU in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (43326673..43328299, complement)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene transmembrane 7 superfamily member 2 Neighboring gene zinc finger HIT-type containing 2 Neighboring gene mitochondrial ribosomal protein L49 Neighboring gene synoviolin 1 Neighboring gene speedy/RINGO cell cycle regulator family member C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S30
    Names
    Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30
    ubiquitin-like protein FUBI
    ubiquitin-like/S30 ribosomal fusion protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174731.4 → NP_777156.1  40S ribosomal protein S30

      See identical proteins and their annotated locations for NP_777156.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102873
      UniProtKB/TrEMBL
      H7BWV9, Q3SZG2
      Related
      ENSBTAP00000027728.4, ENSBTAT00000027728.5
      Conserved Domains (2) summary
      cd01793
      Location:1 → 74
      Ubl_FUBI; ubiquitin-like (Ubl) domain found in ubiquitin-like protein FUBI and similar proteins
      pfam04758
      Location:75 → 132
      Ribosomal_S30; Ribosomal protein S30

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      43326673..43328299 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P62865.1 GenPept UniProtKB/Swiss-Prot:P62865
    P62866.1 GenPept UniProtKB/Swiss-Prot:P62866

    Gene LinkOut

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