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    ZNF330 zinc finger protein 330 [ Bos taurus (domestic cattle) ]

    Gene ID: 533230, updated on 27-Dec-2024

    Summary

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    Gene symbol
    ZNF330
    Gene description
    zinc finger protein 330
    See related
    BGD:BT25278; Ensembl:ENSBTAG00000000297
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF330 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (16533917..16553533, complement)

    Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene inositol polyphosphate-4-phosphatase type II B Neighboring gene glutathione S-transferase A4-like Neighboring gene interleukin 15 Neighboring gene regulator of nonsense transcripts 3B-like Neighboring gene ring finger protein 150 Neighboring gene transfer RNA arginine (anticodon CCU)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC134446

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 330
    Names
    nucleolar autoantigen 36

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038157.2 → NP_001033246.1  zinc finger protein 330

      See identical proteins and their annotated locations for NP_001033246.1

      Status: PROVISIONAL

      Source sequence(s)
      BC109643
      UniProtKB/Swiss-Prot
      Q32LC9
      UniProtKB/TrEMBL
      A0AAA9TH29
      Related
      ENSBTAP00000000370.4, ENSBTAT00000000370.5
      Conserved Domains (1) summary
      pfam06524
      Location:1 → 259
      NOA36; NOA36 protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      16533917..16553533 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005217567.5 → XP_005217624.1  zinc finger protein 330 isoform X1

      See identical proteins and their annotated locations for XP_005217624.1

      UniProtKB/Swiss-Prot
      Q32LC9
      UniProtKB/TrEMBL
      A0AAA9TH29
      Related
      ENSBTAP00000086199.1, ENSBTAT00000091627.1
      Conserved Domains (1) summary
      pfam06524
      Location:1 → 259
      NOA36; NOA36 protein

    2. XM_010813746.4 → XP_010812048.1  zinc finger protein 330 isoform X1

      See identical proteins and their annotated locations for XP_010812048.1

      UniProtKB/Swiss-Prot
      Q32LC9
      UniProtKB/TrEMBL
      A0AAA9TH29
      Conserved Domains (1) summary
      pfam06524
      Location:1 → 259
      NOA36; NOA36 protein

    3. XM_059876072.1 → XP_059732055.1  zinc finger protein 330 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q32LC9.1 GenPept UniProtKB/Swiss-Prot:Q32LC9

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