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    PFDN6 prefoldin subunit 6 [ Bos taurus (domestic cattle) ]

    Gene ID: 509914, updated on 27-Dec-2024

    Summary

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    Official Symbol
    PFDN6provided by VGNC
    Official Full Name
    prefoldin subunit 6provided by VGNC
    Primary source
    VGNC:VGNC:32768
    See related
    BGD:BT13273; Ensembl:ENSBTAG00000010723
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PFDN6 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (7463508..7464809)

    Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-galactosyltransferase 4 Neighboring gene WD repeat domain 46 Neighboring gene ral guanine nucleotide dissociation stimulator like 2 Neighboring gene TAP binding protein Neighboring gene microRNA mir-2376

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC142467

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-folding chaperone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chaperone-mediated protein complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of prefoldin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prefoldin subunit 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075421.2 → NP_001068889.1  prefoldin subunit 6

      Status: PROVISIONAL

      Source sequence(s)
      BC118486
      UniProtKB/Swiss-Prot
      Q17Q89
      Related
      ENSBTAP00000022382.4, ENSBTAT00000022382.6
      Conserved Domains (1) summary
      cd00632
      Location:9 → 113
      Prefoldin_beta; Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two evolutionarily related subunits (alpha and beta), which are found in both eukaryotes and archaea. Prefoldin binds and stabilizes newly synthesized polypeptides ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      7463508..7464809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005223224.5 → XP_005223281.1  prefoldin subunit 6 isoform X1

      UniProtKB/Swiss-Prot
      Q17Q89
      Conserved Domains (1) summary
      cd00632
      Location:9 → 113
      Prefoldin_beta; Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two evolutionarily related subunits (alpha and beta), which are found in both eukaryotes and archaea. Prefoldin binds and stabilizes newly synthesized polypeptides ...

    2. XM_005223223.5 → XP_005223280.1  prefoldin subunit 6 isoform X1

      UniProtKB/Swiss-Prot
      Q17Q89
      Conserved Domains (1) summary
      cd00632
      Location:9 → 113
      Prefoldin_beta; Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two evolutionarily related subunits (alpha and beta), which are found in both eukaryotes and archaea. Prefoldin binds and stabilizes newly synthesized polypeptides ...

    3. XM_059880283.1 → XP_059736266.1  prefoldin subunit 6 isoform X1

      UniProtKB/Swiss-Prot
      Q17Q89

    4. XM_010818031.4 → XP_010816333.1  prefoldin subunit 6 isoform X1

      UniProtKB/Swiss-Prot
      Q17Q89
      Conserved Domains (1) summary
      cd00632
      Location:9 → 113
      Prefoldin_beta; Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two evolutionarily related subunits (alpha and beta), which are found in both eukaryotes and archaea. Prefoldin binds and stabilizes newly synthesized polypeptides ...
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q17Q89.1 GenPept UniProtKB/Swiss-Prot:Q17Q89

    Gene LinkOut

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    Research Materials