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    ADGB androglobin [ Bos taurus (domestic cattle) ]

    Gene ID: 528523, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ADGBprovided by VGNC
    Official Full Name
    androglobinprovided by VGNC
    Primary source
    VGNC:VGNC:25656
    See related
    Ensembl:ENSBTAG00000016844
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C6orf103; C9H6orf103
    Orthologs
    human mouse all
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    Genomic context

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    See ADGB in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (83902382..84100528)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene RAB32, member RAS oncogene family Neighboring gene F-box only protein 25-like Neighboring gene medium-chain specific acyl-CoA dehydrogenase, mitochondrial Neighboring gene calcium-independent phospholipase A2-gamma-like Neighboring gene syntaxin binding protein 5 Neighboring gene tyrosine-protein kinase RYK-like Neighboring gene UL16-binding protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-dependent cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    androglobin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206737.1 → NP_001193666.1  androglobin

      Status: VALIDATED

      Source sequence(s)
      BE684929, CB447188, DY042313, FE005745, NKLS02000009
      UniProtKB/TrEMBL
      G3MXR8
      Related
      ENSBTAP00000054337.3, ENSBTAT00000063488.3
      Conserved Domains (2) summary
      cd01040
      Location:777 → 867
      Mb_like; myoglobin_like; M family globin domain
      cl00051
      Location:190 → 297
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      83902382..84100528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024996676.2 → XP_024852444.1  androglobin isoform X1

      UniProtKB/TrEMBL
      G3MXR8
      Conserved Domains (2) summary
      cd01040
      Location:775 → 865
      Mb_like; myoglobin_like; M family globin domain
      cl00051
      Location:190 → 297
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.

    2. XM_059889738.1 → XP_059745721.1  androglobin isoform X2

    RNA

    1. XR_003036243.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials