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    EEF1B2 eukaryotic translation elongation factor 1 beta 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 520875, updated on 27-Dec-2024

    Summary

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    Official Symbol
    EEF1B2provided by VGNC
    Official Full Name
    eukaryotic translation elongation factor 1 beta 2provided by VGNC
    Primary source
    VGNC:VGNC:54422
    See related
    BGD:BT22377; Ensembl:ENSBTAG00000021979
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    EEF1B
    Orthologs
    human mouse all
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    Genomic context

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    See EEF1B2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (94490099..94493384)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene NADH:ubiquinone oxidoreductase core subunit S1 Neighboring gene small nucleolar RNA SNORD51 Neighboring gene small nucleolar RNA SNORA41 Neighboring gene chemerin chemokine-like receptor 2 Neighboring gene uncharacterized LOC132343216 Neighboring gene zinc finger DBF-type containing 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of eukaryotic translation elongation factor 1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation factor 1-beta
    Names
    EF-1-beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014936.1 → NP_001014936.1  elongation factor 1-beta

      Status: PROVISIONAL

      Source sequence(s)
      BT021037
      UniProtKB/Swiss-Prot
      A6QLF3, Q56JY7, Q5E983
      UniProtKB/TrEMBL
      A0AAF6ZVE8
      Related
      ENSBTAP00000029304.1, ENSBTAT00000029304.2
      Conserved Domains (2) summary
      cd10308
      Location:3 → 62
      GST_C_eEF1b_like; Glutathione S-transferase C-terminal-like, alpha helical domain of eukaryotic translation Elongation Factor 1 beta
      pfam00736
      Location:142 → 225
      EF1_GNE; EF-1 guanine nucleotide exchange domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      94490099..94493384
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059874549.1 → XP_059730532.1  elongation factor 1-beta isoform X1

      UniProtKB/Swiss-Prot
      A6QLF3, Q56JY7, Q5E983
      UniProtKB/TrEMBL
      A0AAF6ZVE8
      Related
      ENSBTAP00000058501.2, ENSBTAT00000078391.2
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5E983.3 GenPept UniProtKB/Swiss-Prot:Q5E983

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.