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    TASP1 taspase 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 532606, updated on 1-Jan-2025

    Summary

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    Official Symbol
    TASP1provided by VGNC
    Official Full Name
    taspase 1provided by VGNC
    Primary source
    VGNC:VGNC:35615
    See related
    BGD:BT20932; Ensembl:ENSBTAG00000021614
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C20orf13
    Orthologs
    human mouse all
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    Genomic context

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    See TASP1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (6933390..7250833, complement)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene serine palmitoyltransferase long chain base subunit 3 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene uncharacterized LOC112449246 Neighboring gene isthmin 1 Neighboring gene cytochrome c oxidase subunit 7A2, mitochondrial-like Neighboring gene ESF1 nucleolar pre-rRNA processing protein homolog Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC139584

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables asparaginase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables beta-aspartyl-peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables threonine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein maturation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    threonine aspartase 1
    Names
    taspase, threonine aspartase, 1
    NP_001029749.2
    XP_005214128.1
    XP_010809336.1
    XP_015329433.1
    XP_024856458.1
    XP_024856460.1
    XP_024856461.1
    XP_024856462.1
    XP_024856463.1
    XP_059748658.1
    XP_059748659.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034577.2 → NP_001029749.2  threonine aspartase 1

      See identical proteins and their annotated locations for NP_001029749.2

      Status: PROVISIONAL

      Source sequence(s)
      BC119884
      UniProtKB/TrEMBL
      F1MVF4, F6RT78, Q0VD17
      Related
      ENSBTAP00000028803.4, ENSBTAT00000028803.6
      Conserved Domains (1) summary
      cd04514
      Location:42 → 416
      Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      6933390..7250833 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025000695.2 → XP_024856463.1  threonine aspartase 1 isoform X6

      UniProtKB/TrEMBL
      A0AAA9TZH2, A0AAA9U1S9
      Related
      ENSBTAP00000103232.1, ENSBTAT00000130985.1
      Conserved Domains (1) summary
      cd04514
      Location:42 → 391
      Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins

    2. XM_025000693.2 → XP_024856461.1  threonine aspartase 1 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TKU1
      Conserved Domains (1) summary
      cd04514
      Location:42 → 348
      Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins

    3. XM_025000694.2 → XP_024856462.1  threonine aspartase 1 isoform X5

      UniProtKB/TrEMBL
      A0AAA9TKU1
      Conserved Domains (1) summary
      cd04514
      Location:42 → 308
      Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins

    4. XM_010811034.3 → XP_010809336.1  threonine aspartase 1 isoform X7

      UniProtKB/TrEMBL
      A0AAA9U2C8, F6RT78
      Related
      ENSBTAP00000103623.1, ENSBTAT00000115477.1
      Conserved Domains (1) summary
      cd04514
      Location:42 → 379
      Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins

    5. XM_005214071.4 → XP_005214128.1  threonine aspartase 1 isoform X4

      See identical proteins and their annotated locations for XP_005214128.1

      UniProtKB/TrEMBL
      F1MVF4, F6RT78, Q0VD17
      Conserved Domains (1) summary
      cd04514
      Location:42 → 416
      Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins

    6. XM_059892675.1 → XP_059748658.1  threonine aspartase 1 isoform X2

      UniProtKB/TrEMBL
      A0AAA9TKU1

    7. XM_025000690.2 → XP_024856458.1  threonine aspartase 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SXC2, A0AAA9TKU1
      Related
      ENSBTAP00000088856.1, ENSBTAT00000102078.1
      Conserved Domains (1) summary
      cd04514
      Location:42 → 348
      Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins

    8. XM_025000692.2 → XP_024856460.1  threonine aspartase 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SXC2, A0AAA9TKU1
      Conserved Domains (1) summary
      cd04514
      Location:42 → 348
      Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins

    9. XM_015473947.3 → XP_015329433.1  threonine aspartase 1 isoform X4

      UniProtKB/TrEMBL
      F1MVF4, F6RT78, Q0VD17
      Conserved Domains (1) summary
      cd04514
      Location:42 → 416
      Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins

    10. XM_059892676.1 → XP_059748659.1  threonine aspartase 1 isoform X8

    Nucleotide Protein Strain
    Heading Accession and Version

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