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    Zwilch zwilch kinetochore protein [ Mus musculus (house mouse) ]

    Gene ID: 68014, updated on 27-Nov-2024

    Summary

    Official Symbol
    Zwilchprovided by MGI
    Official Full Name
    zwilch kinetochore proteinprovided by MGI
    Primary source
    MGI:MGI:1915264
    See related
    Ensembl:ENSMUSG00000032400 AllianceGenome:MGI:1915264
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310031L18Rik
    Summary
    Predicted to be involved in mitotic spindle assembly checkpoint signaling and protein localization to kinetochore. Predicted to be located in kinetochore. Predicted to be part of RZZ complex. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system; and skin. Orthologous to human ZWILCH (zwilch kinetochore protein). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in liver E14 (RPKM 15.3), CNS E11.5 (RPKM 11.6) and 15 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Zwilch in Genome Data Viewer
    Location:
    9 C; 9 34.52 cM
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (64044426..64080210, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (64137144..64173104, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene Scarletltr, erythroid developmental long intergenic non-protein coding transcript Neighboring gene STARR-positive B cell enhancer ABC_E11410 Neighboring gene predicted gene, 39360 Neighboring gene lactase-like Neighboring gene STARR-seq mESC enhancer starr_24420 Neighboring gene small nucleolar RNA, C/D box 16A Neighboring gene predicted gene, 23344 Neighboring gene ribosomal protein L4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in mitotic spindle assembly checkpoint signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitotic spindle assembly checkpoint signaling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in mitotic spindle assembly checkpoint signaling ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein localization to kinetochore IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein localization to kinetochore IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein localization to kinetochore ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of RZZ complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of RZZ complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of RZZ complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in kinetochore ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein zwilch homolog
    Names
    Zwilch, kinetochore associated, homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001407828.1NP_001394757.1  protein zwilch homolog isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC114674, AC160118
      UniProtKB/TrEMBL
      H3BKZ0
      Related
      ENSMUSP00000135585.2, ENSMUST00000176299.8
    2. NM_026507.5NP_080783.4  protein zwilch homolog isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC114674, AC160118
      Consensus CDS
      CCDS23275.2
      UniProtKB/Swiss-Prot
      Q8R060, Q9D2E4, Q9D761
      Related
      ENSMUSP00000112790.3, ENSMUST00000122091.8

    RNA

    1. NR_176424.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC114674, AC160118

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      64044426..64080210 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_379449.4 RNA Sequence