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    Vmn2r96 vomeronasal 2, receptor 96 [ Mus musculus (house mouse) ]

    Gene ID: 433070, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Vmn2r96provided by MGI
    Official Full Name
    vomeronasal 2, receptor 96provided by MGI
    Primary source
    MGI:MGI:3644514
    See related
    Ensembl:ENSMUSG00000091679 AllianceGenome:MGI:3644514
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG433070
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Vmn2r96 in Genome Data Viewer
    Location:
    17 A3.2; 17 11.4 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (18793282..18818419)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (18573255..18598157)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_41977 Neighboring gene vomeronasal 2, receptor 95 Neighboring gene vomeronasal 2, receptor, pseudogene 114 Neighboring gene STARR-seq mESC enhancer starr_41979 Neighboring gene STARR-seq mESC enhancer starr_41980 Neighboring gene STARR-seq mESC enhancer starr_41981 Neighboring gene STARR-seq mESC enhancer starr_41982 Neighboring gene vomeronasal 2, receptor, pseudogene 115 Neighboring gene STARR-seq mESC enhancer starr_41983 Neighboring gene vomeronasal 2, receptor, pseudogene 116

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Young JM, et al. Trends Genet, 2007 May. PMID 17382427
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    vomeronasal 2, receptor 96
    Names
    vomeronasal receptor Vmn2r96

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001385081.1 → NP_001372010.1  vomeronasal 2, receptor 96 precursor

      Status: VALIDATED

      Source sequence(s)
      AC151987
      Consensus CDS
      CCDS49974.1
      UniProtKB/TrEMBL
      E9PZU5, K7N6Z2
      Related
      ENSMUSP00000135095.3, ENSMUST00000177244.4
      Conserved Domains (3) summary
      cd15283
      Location:582 → 833
      7tmC_V2R_pheromone; vomeronasal type-2 pheromone receptors, member of the class C family of seven-transmembrane G protein-coupled receptors
      cd06365
      Location:42 → 501
      PBP1_pheromone_receptor; Ligand-binding domain of the V2R pheromone receptor, a member of the family C receptors within the G-protein coupled receptor superfamily
      pfam07562
      Location:509 → 562
      NCD3G; Nine Cysteines Domain of family 3 GPCR

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      18793282..18818419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001104547.1: Suppressed sequence

      Description
      NM_001104547.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein
    Heading Accession and Version

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