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    Gm15455 predicted gene 15455 [ Mus musculus (house mouse) ]

    Gene ID: 433287, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Gm15455provided by MGI
    Official Full Name
    predicted gene 15455provided by MGI
    Primary source
    MGI:MGI:3705563
    See related
    Ensembl:ENSMUSG00000081402 AllianceGenome:MGI:3705563
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See Gm15455 in Genome Data Viewer
    Location:
    1 B; 1 12.84 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (33874980..33877995, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (33835899..33838914, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_00543 Neighboring gene BCL2-associated athanogene 2 Neighboring gene zinc finger protein 451 Neighboring gene STARR-positive B cell enhancer ABC_E7716 Neighboring gene BEN domain containing 6 Neighboring gene predicted gene, 38471 Neighboring gene STARR-seq mESC enhancer starr_00549 Neighboring gene dystonin Neighboring gene predicted gene, 53546 Neighboring gene predicted gene, 23792

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome. Mural RJ, et al. Science, 2002 May 31. PMID 12040188
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC189802, MGC189806

    General protein information

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    Preferred Names
    RNA binding motif protein 10-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001161816.1 → NP_001155288.1  RNA binding motif protein 10-like

      See identical proteins and their annotated locations for NP_001155288.1

      Status: VALIDATED

      Source sequence(s)
      AC163668, BC157993
      Related
      ENSMUST00000117459.3
      Conserved Domains (6) summary
      smart00547
      Location:140 → 162
      ZnF_RBZ; Zinc finger domain
      cd12754
      Location:221 → 307
      RRM2_RBM10; RNA recognition motif 2 in vertebrate RNA-binding protein 10 (RBM10)
      sd00029
      Location:140 → 159
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam01585
      Location:780 → 824
      G-patch; G-patch domain
      cd16167
      Location:486 → 549
      OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
      cl17169
      Location:67 → 134
      RRM_SF; RNA recognition motif (RRM) superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      33874980..33877995 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_008219.1: Suppressed sequence

      Description
      NG_008219.1: This RefSeq was permanently suppressed because there is evidence that this locus is transcribed.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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