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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001242648.4 → NP_001229577.1 phosphatase and actin regulator 1 isoform a
See identical proteins and their annotated locations for NP_001229577.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 all encode isoform a.
- Source sequence(s)
-
AL008729, AL354680, AL391385, AL591682, Z99495
- Consensus CDS
-
CCDS75401.1
- UniProtKB/Swiss-Prot
- A8K1V2, Q3MJ93, Q5JSJ2, Q9C0D0
- UniProtKB/TrEMBL
-
A0A8I5KVE0
- Related
- ENSP00000501921.1, ENST00000676159.1
- Conserved Domains (2) summary
-
- smart00707
Location:461 → 485
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:140 → 161
- RPEL; RPEL repeat
-
NM_001322308.3 → NP_001309237.1 phosphatase and actin regulator 1 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 all encode isoform a.
- Source sequence(s)
-
AL008729, AL354680, AL391385, AL591682, Z99495
- Consensus CDS
-
CCDS75401.1
- UniProtKB/Swiss-Prot
- A8K1V2, Q3MJ93, Q5JSJ2, Q9C0D0
- UniProtKB/TrEMBL
-
A0A8I5KVE0
- Related
- ENSP00000509837.1, ENST00000689548.1
- Conserved Domains (2) summary
-
- smart00707
Location:461 → 485
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:140 → 161
- RPEL; RPEL repeat
-
NM_001322309.3 → NP_001309238.1 phosphatase and actin regulator 1 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 all encode isoform a.
- Source sequence(s)
-
AL008729, AL354680, AL391385, AL591682, Z99495
- Consensus CDS
-
CCDS75401.1
- UniProtKB/Swiss-Prot
- A8K1V2, Q3MJ93, Q5JSJ2, Q9C0D0
- UniProtKB/TrEMBL
-
A0A8I5KVE0
- Conserved Domains (2) summary
-
- smart00707
Location:461 → 485
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:140 → 161
- RPEL; RPEL repeat
-
NM_001322310.2 → NP_001309239.1 phosphatase and actin regulator 1 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and includes an additional in-frame exon in the central coding region, compared to variant 1, resulting in an isoform (b) that is longer than isoform a.
- Source sequence(s)
-
AL008729, AL354680, AL391385, AL591682, Z99495
- UniProtKB/TrEMBL
-
A0A8I5KVE0
- Conserved Domains (2) summary
-
- smart00707
Location:530 → 554
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:140 → 161
- RPEL; RPEL repeat
-
NM_001322311.2 → NP_001309240.1 phosphatase and actin regulator 1 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks several 5' exons but contains an alternate 5' terminal exon, and it thus differs in the 5' UTR and initiates translation from a downstream in-frame start codon, compared to variant 1. The encoded isoform (c) is shorter at the N-terminus, compared to isoform a. Both variants 6 and 7 encode isoform c.
- Source sequence(s)
-
AL008729, AL391385, AL591682
- Consensus CDS
-
CCDS93860.1
- UniProtKB/TrEMBL
- A0A6Q8PFA8, A0A8I5KVE0
- Related
- ENSP00000509690.1, ENST00000692995.1
- Conserved Domains (3) summary
-
- smart00707
Location:369 → 393
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:48 → 69
- RPEL; RPEL repeat
- cl29414
Location:330 → 354
- RPEL; RPEL repeat
-
NM_001322312.3 → NP_001309241.1 phosphatase and actin regulator 1 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks several 5' exons but contains an alternate 5' terminal exon, and it thus differs in the 5' UTR and initiates translation from a downstream in-frame start codon, compared to variant 1. The encoded isoform (c) is shorter at the N-terminus, compared to isoform a. Both variants 6 and 7 encode isoform c.
- Source sequence(s)
-
AL008729, AL391385, AL591682
- Consensus CDS
-
CCDS93860.1
- UniProtKB/TrEMBL
- A0A6Q8PFA8, A0A8I5KVE0
- Related
- ENSP00000502037.1, ENST00000676234.1
- Conserved Domains (3) summary
-
- smart00707
Location:369 → 393
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:48 → 69
- RPEL; RPEL repeat
- cl29414
Location:330 → 354
- RPEL; RPEL repeat
-
NM_001322313.2 → NP_001309242.1 phosphatase and actin regulator 1 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) lacks several 5' exons but contains an alternate 5' terminal exon, and it thus differs in the 5' UTR and initiates translation from a downstream in-frame start codon, and it also includes an additional in-frame exon in the central coding region, compared to variant 1. The encoded isoform (d) is shorter at the N-terminus, compared to isoform a.
- Source sequence(s)
-
AL008729, AL391385, AL591682
- Consensus CDS
-
CCDS93859.1
- UniProtKB/TrEMBL
- A0A8I5KVE0, A0A8I5QJF9
- Related
- ENSP00000509410.1, ENST00000687600.1
- Conserved Domains (3) summary
-
- smart00707
Location:438 → 462
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:48 → 69
- RPEL; RPEL repeat
- cl29414
Location:399 → 423
- RPEL; RPEL repeat
-
NM_001322314.4 → NP_001309243.1 phosphatase and actin regulator 1 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) lacks several 5' exons but contains an alternate 5' terminal exon, and it thus differs in the 5' UTR and initiates translation from an alternate start codon, and it also includes an additional in-frame exon in the central coding region, compared to variant 1. The encoded isoform (e) has a distinct N-terminus and is longer than isoform a.
- Source sequence(s)
-
AL008729, AL391385, AL591682
- Consensus CDS
-
CCDS93858.1
- UniProtKB/TrEMBL
-
A0A6Q8PGC2
- Related
- ENSP00000502172.2, ENST00000675203.2
- Conserved Domains (2) summary
-
- smart00707
Location:531 → 555
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:141 → 162
- RPEL; RPEL repeat
-
NM_001374581.2 → NP_001361510.1 phosphatase and actin regulator 1 isoform f
Status: REVIEWED
- Source sequence(s)
-
AL008729, AL354680, AL391385, AL591682, Z99495
- Consensus CDS
-
CCDS93857.1
- UniProtKB/TrEMBL
- A0A6Q8PG87, A0A8I5KVE0
- Related
- ENSP00000502157.1, ENST00000674595.1
- Conserved Domains (3) summary
-
- smart00707
Location:461 → 485
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:140 → 161
- RPEL; RPEL repeat
- cl29414
Location:422 → 446
- RPEL; RPEL repeat
-
NM_001374582.1 → NP_001361511.1 phosphatase and actin regulator 1 isoform g
Status: REVIEWED
- Source sequence(s)
-
AL008729, AL354680, AL391385, AL591682, Z99495
- UniProtKB/TrEMBL
-
B4DHU0
- Conserved Domains (2) summary
-
- smart00707
Location:491 → 515
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:140 → 161
- RPEL; RPEL repeat
-
NM_001374583.2 → NP_001361512.1 phosphatase and actin regulator 1 isoform h
Status: REVIEWED
- Source sequence(s)
-
AL008729, AL391385, AL591682
- UniProtKB/TrEMBL
-
A0A8I5KVE0
- Conserved Domains (3) summary
-
- smart00707
Location:369 → 393
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:48 → 69
- RPEL; RPEL repeat
- cl29414
Location:330 → 354
- RPEL; RPEL repeat
-
NM_001374584.1 → NP_001361513.1 phosphatase and actin regulator 1 isoform i
Status: REVIEWED
- Source sequence(s)
-
AL354680, Z99495
- Related
-
ENST00000690071.1
-
NM_030948.6 → NP_112210.1 phosphatase and actin regulator 1 isoform a
See identical proteins and their annotated locations for NP_112210.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform a. Variants 1, 2, 3 and 4 all encode isoform a.
- Source sequence(s)
-
AL008729, AL354680, AL391385, AL591682, Z99495
- Consensus CDS
-
CCDS75401.1
- UniProtKB/Swiss-Prot
- A8K1V2, Q3MJ93, Q5JSJ2, Q9C0D0
- UniProtKB/TrEMBL
-
A0A8I5KVE0
- Related
- ENSP00000329880.8, ENST00000332995.12
- Conserved Domains (2) summary
-
- smart00707
Location:461 → 485
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:140 → 161
- RPEL; RPEL repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
12716767..13287837
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005248934.4 → XP_005248991.1 phosphatase and actin regulator 1 isoform X1
See identical proteins and their annotated locations for XP_005248991.1
- UniProtKB/TrEMBL
-
A0A8I5KVE0
- Conserved Domains (2) summary
-
- smart00707
Location:530 → 554
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:140 → 161
- RPEL; RPEL repeat
-
XM_047418373.1 → XP_047274329.1 phosphatase and actin regulator 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5KVE0
-
XM_047418372.1 → XP_047274328.1 phosphatase and actin regulator 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5KVE0
-
XM_017010459.3 → XP_016865948.1 phosphatase and actin regulator 1 isoform X3
- UniProtKB/TrEMBL
- A0A6Q8PG87, A0A8I5KVE0
- Conserved Domains (3) summary
-
- smart00707
Location:461 → 485
- RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
- pfam02755
Location:140 → 161
- RPEL; RPEL repeat
- cl29414
Location:422 → 446
- RPEL; RPEL repeat
-
XM_047418374.1 → XP_047274330.1 phosphatase and actin regulator 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5KVE0
-
XM_017010464.3 → XP_016865953.1 phosphatase and actin regulator 1 isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KVE0
-
XM_047418375.1 → XP_047274331.1 phosphatase and actin regulator 1 isoform X5
- UniProtKB/TrEMBL
- A0A8I5KVE0, A0A8I5QJF9
-
XM_017010458.3 → XP_016865947.1 phosphatase and actin regulator 1 isoform X2
- UniProtKB/TrEMBL
-
A0A8I5KVE0
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
12585196..13161093
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054354633.1 → XP_054210608.1 phosphatase and actin regulator 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5KVE0
-
XM_054354635.1 → XP_054210610.1 phosphatase and actin regulator 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5KVE0
-
XM_054354634.1 → XP_054210609.1 phosphatase and actin regulator 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5KVE0
-
XM_054354638.1 → XP_054210613.1 phosphatase and actin regulator 1 isoform X3
- UniProtKB/TrEMBL
- A0A6Q8PG87, A0A8I5KVE0
-
XM_054354636.1 → XP_054210611.1 phosphatase and actin regulator 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5KVE0
-
XM_054354639.1 → XP_054210614.1 phosphatase and actin regulator 1 isoform X4
- UniProtKB/TrEMBL
-
A0A8I5KVE0
-
XM_054354637.1 → XP_054210612.1 phosphatase and actin regulator 1 isoform X2
- UniProtKB/TrEMBL
-
A0A8I5KVE0