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    C3H4 type zinc finger protein (DUF23) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834072, updated on 18-Sep-2024

    Summary

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    Official Full Name
    C3H4 type zinc finger protein (DUF23)
    Primary source
    TAIR:AT5G40720
    Locus tag
    AT5G40720
    See related
    Araport:AT5G40720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MNF13.28; MNF13_28
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (16297300..16300037)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene transcriptional regulator ATRX-like protein Neighboring gene zinc finger (C2H2 type) family protein Neighboring gene arabinogalactan protein 24 Neighboring gene HAUS augmin-like complex subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001344351.1
    NM_123437.4

    General protein information

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    Preferred Names
    C3H4 type zinc finger protein (DUF23)
    NP_198888.1
    • CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16297300..16300037
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344350.1 → NP_001330147.1  C3H4 type zinc finger protein (DUF23) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6W0, Q93ZP5, Q9FM26

    2. NM_123437.4 → NP_198888.1  C3H4 type zinc finger protein (DUF23) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198888.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6W0, Q93ZP5, Q9FM26
      Conserved Domains (1) summary
      pfam01697
      Location:273 → 487
      Glyco_transf_92; Glycosyltransferase family 92

    3. NM_001344351.1 → NP_001330148.1  C3H4 type zinc finger protein (DUF23) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6W0, Q93ZP5, Q9FM26
    Nucleotide Protein
    Heading Accession and Version

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