U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Plaur plasminogen activator, urokinase receptor [ Mus musculus (house mouse) ]

    Gene ID: 18793, updated on 27-Nov-2024

    Summary

    Official Symbol
    Plaurprovided by MGI
    Official Full Name
    plasminogen activator, urokinase receptorprovided by MGI
    Primary source
    MGI:MGI:97612
    See related
    Ensembl:ENSMUSG00000046223 AllianceGenome:MGI:97612
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cd87; uPAR; u-PAR
    Summary
    Predicted to enable enzyme binding activity; protein domain specific binding activity; and signaling receptor binding activity. Predicted to be involved in several processes, including negative regulation of apoptotic signaling pathway; positive regulation of epidermal growth factor receptor signaling pathway; and positive regulation of release of cytochrome c from mitochondria. Located in plasma membrane. Part of serine-type endopeptidase complex. Is expressed in several structures, including decidua; early conceptus; and spleen. Human ortholog(s) of this gene implicated in rheumatoid arthritis. Orthologous to human PLAUR (plasminogen activator, urokinase receptor). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in lung adult (RPKM 24.3), spleen adult (RPKM 16.2) and 16 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Plaur in Genome Data Viewer
    Location:
    7 A3; 7 10.92 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (24161857..24175393)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (24460937..24475970)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_18260 Neighboring gene predicted gene, 36159 Neighboring gene predicted gene, 57507 Neighboring gene STARR-seq mESC enhancer starr_18263 Neighboring gene predicted gene, 53353 Neighboring gene cell adhesion molecule 4 Neighboring gene zinc finger protein 428

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (6) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables enzyme binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein domain specific binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein domain specific binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables signaling receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in epithelial cell differentiation involved in prostate gland development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in mesenchymal cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cysteine-type endopeptidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of intrinsic apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of intrinsic apoptotic signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of epidermal growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of epidermal growth factor receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of homotypic cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of homotypic cell-cell adhesion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of protein phosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of release of cytochrome c from mitochondria IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of release of cytochrome c from mitochondria ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of cell adhesion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of fibrinolysis NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in regulation of plasminogen activation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in urokinase plasminogen activator signaling pathway NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in external side of plasma membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein complex involved in cell-matrix adhesion ISO
    Inferred from Sequence Orthology
    more info
     
    part_of serine-type endopeptidase complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of serine-type endopeptidase complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    urokinase plasminogen activator surface receptor
    Names
    urokinase plasminogen activator receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011113.4NP_035243.1  urokinase plasminogen activator surface receptor precursor

      See identical proteins and their annotated locations for NP_035243.1

      Status: VALIDATED

      Source sequence(s)
      AC161166, AK002580, AK131951
      Consensus CDS
      CCDS20950.1
      UniProtKB/Swiss-Prot
      P35456, P35457
      UniProtKB/TrEMBL
      Q3U2D1, Q545X5
      Related
      ENSMUSP00000002284.10, ENSMUST00000002284.11
      Conserved Domains (2) summary
      smart00134
      Location:213300
      LU; Ly-6 antigen / uPA receptor -like domain
      pfam00021
      Location:26100
      UPAR_LY6; u-PAR/Ly-6 domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      24161857..24175393
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036152789.1XP_036008682.1  urokinase plasminogen activator surface receptor isoform X1

      UniProtKB/TrEMBL
      Q3U2D1
      Conserved Domains (1) summary
      smart00134
      Location:24106
      LU; Ly-6 antigen / uPA receptor -like domain

    RNA

    1. XR_004934042.1 RNA Sequence