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    Sprr2a3 small proline-rich protein 2A3 [ Mus musculus (house mouse) ]

    Gene ID: 100042514, updated on 4-Jan-2025

    Summary

    Official Symbol
    Sprr2a3provided by MGI
    Official Full Name
    small proline-rich protein 2A3provided by MGI
    Primary source
    MGI:MGI:3845028
    See related
    Ensembl:ENSMUSG00000074445 AllianceGenome:MGI:3845028
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sprr2a; Sprr2a1
    Summary
    Predicted to enable lipid binding activity. Involved in defense response to Gram-positive bacterium. Is active in extracellular region and secretory granule. Is expressed in stomach and thymus primordium. [provided by Alliance of Genome Resources, Jan 2025]
    Expression
    Biased expression in stomach adult (RPKM 7615.5), small intestine adult (RPKM 5309.9) and 4 other tissues See more
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    Genomic context

    See Sprr2a3 in Genome Data Viewer
    Location:
    3 F1; 3 40.14 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92192611..92196571)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92285304..92289264)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene small proline-rich protein 2A2 Neighboring gene STARR-positive B cell enhancer mm9_chr3:92069949-92070249 Neighboring gene STARR-positive B cell enhancer mm9_chr3:92070431-92070732 Neighboring gene STARR-positive B cell enhancer mm9_chr3:92071949-92072250 Neighboring gene ribosomal protein L3 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr3:92074536-92074836 Neighboring gene STARR-positive B cell enhancer mm9_chr3:92080442-92080742 Neighboring gene STARR-seq mESC enhancer starr_08311 Neighboring gene small proline-rich protein 2B Neighboring gene small proline-rich protein 2C, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Clone Names

    • MGC117544

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables lipid binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in defense response to Gram-positive bacterium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cornified envelope IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in secretory granule IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in transport vesicle IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    small proline-rich protein 2A3
    Names
    Small proline-rich protein 2A1
    small proline-rich protein 2A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001309382.1NP_001296311.1  small proline-rich protein 2A3

      See identical proteins and their annotated locations for NP_001296311.1

      Status: VALIDATED

      Source sequence(s)
      AC129296, BY094335, EH096608, EH099857, EH102273
      Consensus CDS
      CCDS84652.1
      UniProtKB/Swiss-Prot
      O70553, Q4KL71, Q9CQK8
      Related
      ENSMUSP00000142110.2, ENSMUST00000193337.2
      Conserved Domains (1) summary
      pfam14820
      Location:283
      SPRR2; Small proline-rich 2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      92192611..92196571
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)