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    PSB27 photosystem II family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839449, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PSB27
    Official Full Name
    photosystem II family protein
    Primary source
    TAIR:AT1G03600
    Locus tag
    AT1G03600
    See related
    Araport:AT1G03600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F21B7.21
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    Genomic context

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    See PSB27 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (898480..899794)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene Protein phosphatase 2C family protein Neighboring gene plant/protein (DUF789) Neighboring gene ELMO/CED-12 family protein Neighboring gene protochlorophyllide oxidoreductase C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Natural variation of photosynthetic efficiency in Arabidopsis thaliana accessions under low temperature conditions. Prinzenberg AE, et al. Plant Cell Environ, 2020 Aug. PMID 32495939, Free PMC Article
    2. Crystal structure of Psb27 from Arabidopsis thaliana determined at a resolution of 1.85 Å. Xingxing C, et al. Photosynth Res, 2018 May. PMID 29098572, Free PMC Article
    3. Photosystem II supercomplex remodeling serves as an entry mechanism for state transitions in Arabidopsis. Dietzel L, et al. Plant Cell, 2011 Aug. PMID 21880991, Free PMC Article
    4. PSB27: A thylakoid protein enabling Arabidopsis to adapt to changing light intensity. Hou X, et al. Proc Natl Acad Sci U S A, 2015 Feb 3. PMID 25605904, Free PMC Article
    5. LPA19, a Psb27 homolog in Arabidopsis thaliana, facilitates D1 protein precursor processing during PSII biogenesis. Wei L, et al. J Biol Chem, 2010 Jul 9. PMID 20444695, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Natural variation of photosynthetic efficiency in Arabidopsis thaliana accessions under low temperature conditions.
      Title: Natural variation of photosynthetic efficiency in Arabidopsis thaliana accessions under low temperature conditions.
    2. The crystal structure of Arabidopsis Psb27 revealed that Psb27 is a four-helix bundle, similar to its orthologues from cyanobacteria.
      Title: Crystal structure of Psb27 from Arabidopsis thaliana determined at a resolution of 1.85 Å.
    3. Arabidopsis knockout mutants lacking Psb27 display highly accelerated state transitions, indicating that release of PSII supercomplexes is required for phosphorylation and subsequent movement of the antenna.
      Title: Photosystem II supercomplex remodeling serves as an entry mechanism for state transitions in Arabidopsis.
    4. Psb27 is a lumenal protein associated with photosystem II (PSII) and is essential for efficient recovery of the photodamaged PSII. [Psb27]
      Title: A Psb27 homologue in Arabidopsis thaliana is required for efficient repair of photodamaged photosystem II.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_100240.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to light intensity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in photosystem II assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within photosystem II repair IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast thylakoid HDA PubMed 
    located_in chloroplast thylakoid lumen HDA PubMed 
    located_in chloroplast thylakoid lumen IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast thylakoid membrane HDA PubMed 
    located_in extracellular region HDA PubMed 
    part_of photosystem II IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in thylakoid HDA PubMed 

    General protein information

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    Preferred Names
    photosystem II family protein
    NP_563687.1
    • PSB27; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II repair; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 273 Blast hits to 273 proteins in 82 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      898480..899794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100240.3 → NP_563687.1  photosystem II family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563687.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FPJ9, Q9LR64
      UniProtKB/TrEMBL
      A0A178WF34, A0A5S9SE99
      Conserved Domains (1) summary
      PLN00064
      Location:8 → 174
      PLN00064; photosystem II protein Psb27; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LR64.1

    Gene LinkOut

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