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    ATSERAT3;1 Trimeric LpxA-like enzymes superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816271, updated on 18-Sep-2024

    Summary

    Official Symbol
    ATSERAT3;1
    Official Full Name
    Trimeric LpxA-like enzymes superfamily protein
    Primary source
    TAIR:AT2G17640
    Locus tag
    AT2G17640
    See related
    Araport:AT2G17640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SAT-106; SERINE ACETYLTRANSFERASE 106; T17A5.1; T17A5_1
    Summary
    Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced after long-term sulfur starvation.
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    Genomic context

    See ATSERAT3;1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Sequence:
    Chromosome: 2; NC_003071.7 (7668078..7670495, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Cyclin B2;1 Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene AMP-dependent synthetase and ligase family protein Neighboring gene RPM1-interacting protein 4 (RIN4) family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    NM_127318.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine O-acetyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables serine O-acetyltransferase activity IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    enables serine O-acetyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in cysteine biosynthetic process from serine IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within sulfate assimilation TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Trimeric LpxA-like enzymes superfamily protein
    NP_565421.1
    • ATSERAT3;1; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 3;2 (TAIR:AT4G35640.1); Has 24316 Blast hits to 24306 proteins in 2619 species: Archae - 371; Bacteria - 18535; Metazoa - 5; Fungi - 223; Plants - 313; Viruses - 18; Other Eukaryotes - 4851 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7668078..7670495 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127318.5NP_565421.1  Trimeric LpxA-like enzymes superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565421.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q29Q39, Q8S895, Q9STB0, Q9ZPJ4
      UniProtKB/TrEMBL
      A0A178VYT8, A0A5S9WZ36
      Conserved Domains (1) summary
      cl00160
      Location:1318
      LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...