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    URH2 uridine-ribohydrolase 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837068, updated on 18-Sep-2024

    Summary

    Official Symbol
    URH2
    Official Full Name
    uridine-ribohydrolase 2
    Primary source
    TAIR:AT1G05620
    Locus tag
    AT1G05620
    See related
    Araport:AT1G05620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3F20.7; F3F20_7; NSH2; nucleoside hydrolase 2; uridine-ribohydrolase 2; uridine-ribohydrolase 2
    Summary
    Encodes a cytosolic inosine nucleoside hydrolase. Transcript levels for this gene are elevated in older leaves suggesting that it may play a role in purine catabolism during senescence.
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    Genomic context

    See URH2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (1678881..1681710)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ADP-glucose pyrophosphorylase small subunit 2 Neighboring gene B3 domain protein (DUF313) Neighboring gene Endonuclease/exonuclease/phosphatase family protein Neighboring gene Ankyrin repeat family protein

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001123762.2
    NM_100442.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables UDP-glucosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables inosine nucleosidase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein heterodimerization activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables purine nucleosidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables uridine nucleosidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within inosine catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within leaf senescence IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    uridine-ribohydrolase 2
    NP_001117234.1
    • uridine-ribohydrolase 2 (URH2); FUNCTIONS IN: hydrolase activity, UDP-glucosyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 1 (TAIR:AT2G36310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_563745.1
    • uridine-ribohydrolase 2 (URH2); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 1 (TAIR:AT2G36310.1); Has 6369 Blast hits to 6297 proteins in 1349 species: Archae - 75; Bacteria - 4652; Metazoa - 179; Fungi - 246; Plants - 186; Viruses - 0; Other Eukaryotes - 1031 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1678881..1681710
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100442.5NP_563745.1  uridine-ribohydrolase 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563745.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H6Y7, Q8LAC4, Q9SYK3
      UniProtKB/TrEMBL
      A0A178W6V5, A0A5S9STJ4
      Conserved Domains (1) summary
      PLN02717
      Location:7322
      PLN02717; uridine nucleosidase
    2. NM_001123762.2NP_001117234.1  uridine-ribohydrolase 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117234.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W6V5
      Conserved Domains (1) summary
      PLN02717
      Location:1302
      PLN02717; uridine nucleosidase