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    TPS3 trehalose-phosphatase/synthase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838270, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TPS3
    Official Full Name
    trehalose-phosphatase/synthase 3
    Primary source
    TAIR:AT1G17000
    Locus tag
    AT1G17000
    See related
    Araport:AT1G17000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATTPS3; F20D23.30; F20D23_30; TREHALOSE -6-PHOSPHATASE SYNTHASE S3; trehalose-phosphatase/synthase 3
    Summary
    Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active but no trehalose phosphatase (TPP)-like domain.
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    Genomic context

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    See TPS3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    17
    Sequence:
    Chromosome: 1; NC_003070.9 (5812728..5816662)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ubiquitin domain-containing protein Neighboring gene ATP-dependent DNA helicase 2 subunit Ku70-like protein Neighboring gene trehalose-6-phosphate synthase Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene senescence-related gene 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana. Leyman B, et al. Trends Plant Sci, 2001 Nov. PMID 11701378
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within trehalose biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    trehalose-phosphatase/synthase 3
    NP_173143.4
    • trehalose-phosphatase/synthase 3 (TPS3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 3260 Blast hits to 3210 proteins in 969 species: Archae - 43; Bacteria - 1736; Metazoa - 120; Fungi - 628; Plants - 337; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5812728..5816662
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101560.5 → NP_173143.4  trehalose-phosphatase/synthase 3, partial [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173143.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I628, Q9SHG0
      Conserved Domains (3) summary
      cd03788
      Location:13 → 455
      GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
      PLN03063
      Location:1 → 783
      PLN03063; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
      cl21460
      Location:490 → 702
      HAD_like; Haloacid Dehalogenase-like Hydrolases
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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