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    ARM repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839264, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ARM repeat superfamily protein
    Primary source
    TAIR:AT1G01830
    Locus tag
    AT1G01830
    See related
    Araport:AT1G01830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1N6.25; T1N6_25
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (298451..302310, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene peroxin 11c Neighboring gene ncRNA Neighboring gene AP2-like ethylene-responsive transcription factor SNZ Neighboring gene ncRNA Neighboring gene Ribosomal RNA adenine dimethylase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001083974.2
    NM_001083975.2
    NM_100066.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    ARM repeat superfamily protein
    NP_001077443.1
    • ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3429 Blast hits to 2144 proteins in 215 species: Archae - 2; Bacteria - 14; Metazoa - 502; Fungi - 465; Plants - 2072; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
    NP_001077444.1
    • ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3429 Blast hits to 2144 proteins in 215 species: Archae - 2; Bacteria - 14; Metazoa - 502; Fungi - 465; Plants - 2072; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
    NP_563637.1
    • ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3429 Blast hits to 2144 proteins in 215 species: Archae - 2; Bacteria - 14; Metazoa - 502; Fungi - 465; Plants - 2072; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      298451..302310 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001083975.2 → NP_001077444.1  ARM repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077444.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WI35, A0A5S9S4G8, Q93YW3, Q9LQ72
      Conserved Domains (3) summary
      PLN03200
      Location:208 → 524
      PLN03200; cellulose synthase-interactive protein; Provisional
      sd00044
      Location:166 → 199
      HEAT; HEAT repeat [structural motif]
      sd00043
      Location:371 → 401
      ARM; armadillo repeat [structural motif]

    2. NM_001083974.2 → NP_001077443.1  ARM repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077443.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WI35, A0A5S9S4G8, Q93YW3, Q9LQ72
      Conserved Domains (3) summary
      PLN03200
      Location:208 → 524
      PLN03200; cellulose synthase-interactive protein; Provisional
      sd00044
      Location:166 → 199
      HEAT; HEAT repeat [structural motif]
      sd00043
      Location:371 → 401
      ARM; armadillo repeat [structural motif]

    3. NM_100066.4 → NP_563637.1  ARM repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563637.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WI35, A0A5S9S4G8, Q93YW3, Q9LQ72
      Conserved Domains (3) summary
      PLN03200
      Location:208 → 524
      PLN03200; cellulose synthase-interactive protein; Provisional
      sd00044
      Location:166 → 199
      HEAT; HEAT repeat [structural motif]
      sd00043
      Location:371 → 401
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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