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    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841744, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    Primary source
    TAIR:AT1G53100
    Locus tag
    AT1G53100
    See related
    Araport:AT1G53100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8L10.4; F8L10_4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (19786900..19789150, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Legume lectin family protein Neighboring gene Legume lectin family protein Neighboring gene SPA1-related 4 Neighboring gene ncRNA Neighboring gene proton pump-interactor Neighboring gene RNA-binding S4 domain-containing protein Neighboring gene Stigma-specific Stig1 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glucuronosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    NP_001185208.1
    • Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2).
    NP_175718.2
    • Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT3G15350.2); Has 949 Blast hits to 948 proteins in 119 species: Archae - 0; Bacteria - 46; Metazoa - 553; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19786900..19789150 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198279.1 → NP_001185208.1  Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185208.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WLH8, A0A654EHZ1, F4HPR0
      Conserved Domains (2) summary
      PLN03183
      Location:15 → 409
      PLN03183; acetylglucosaminyltransferase family protein; Provisional
      pfam02485
      Location:83 → 341
      Branch; Core-2/I-Branching enzyme

    2. NM_104189.3 → NP_175718.2  Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175718.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W919, Q6DBE8, Q9LNN5
      Conserved Domains (2) summary
      PLN03183
      Location:15 → 423
      PLN03183; acetylglucosaminyltransferase family protein; Provisional
      pfam02485
      Location:83 → 341
      Branch; Core-2/I-Branching enzyme
    Nucleotide Protein
    Heading Accession and Version

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