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    Cation efflux family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841586, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cation efflux family protein
    Primary source
    TAIR:AT1G51610
    Locus tag
    AT1G51610
    See related
    Araport:AT1G51610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19C24.16
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (19136214..19139989)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene alpha-mannosidase 1 Neighboring gene ncRNA Neighboring gene ZIM-LIKE 2 Neighboring gene Protein kinase superfamily protein Neighboring gene O-fucosyltransferase family protein Neighboring gene ncRNA Neighboring gene exocyst subunit exo70 family protein G2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic relationships within cation transporter families of Arabidopsis. Mäser P, et al. Plant Physiol, 2001 Aug. PMID 11500563, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_104039.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables efflux transmembrane transporter activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in zinc ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Cation efflux family protein
    NP_564594.1
    • Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); Has 3094 Blast hits to 3092 proteins in 1095 species: Archae - 127; Bacteria - 2543; Metazoa - 129; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19136214..19139989
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104039.4 → NP_564594.1  Cation efflux family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564594.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H1G3, Q949W1, Q9C531
      UniProtKB/TrEMBL
      A0A178WIV9, A0A5S9WL17
      Conserved Domains (1) summary
      cl30791
      Location:107 → 381
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8H1G3.1

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